KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128082202
Entry
128082202         CDS       T08967                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04382  Cornified envelope formation
tpai04510  Focal adhesion
tpai04512  ECM-receptor interaction
tpai04518  Integrin signaling
tpai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128082202 (COL4A3)
   04518 Integrin signaling
    128082202 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128082202 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128082202 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128082202 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpai04147]
    128082202 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:tpai00536]
    128082202 (COL4A3)
Exosome [BR:tpai04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128082202 (COL4A3)
Glycosaminoglycan binding proteins [BR:tpai00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128082202 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128082202
NCBI-ProteinID: XP_052542105
LinkDB
Position
Unknown
AA seq 1669 aa
MAGGGCPQRLALLLLLALPWPGRAAAENCVCKGKSPCFCDSVKGNKGEKGFPGVPGPPGH
RGFPGPEGPPGPQGPKGSPGPVGLAGPKGIRGVPGIPGFSGPPGLPGEPGIAGHPGRSGV
PGCNGTKGDRGFPGPPGRRGAPGIPGIAGIKGDKGCPADGYDQGYGAKGDPGLPGMPGHQ
GAQGVQGYPGETGPRGLPGTSGIPGRPGPPGPKGLMGMKVIGTKGRKGDTGLTGPPGPPG
TVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPTGDSQSEKGDQGEPGAQGKPGKEG
APGLPGLPGQNGEQGKPGLAGRQGAKGVKGNTGPPGACGQTEYYDVVGEKGDAGPPGPPG
PKGQRGMPGPQGPPGDAGRPGVSRPGLRGPPGFPGPKGTKGEKGQVGSCIIGPPGLPGIT
GRIGSVGLPGPPGEPGRVTFRTGLPGLPGQPGCAGPPGPPGDMGMKGDEACMCTDCSYIP
GTPGLPGSPGPRGQDGIPGREGAPGPKGAPGSPGAPGFPGAQGPPGFKGDQGRKGSKGEP
GYVYPEGPKGEQGDPGPRGDKGRKGSSGFLGRPGSKGYKGSKGEEGLAGSKGDRGQPGLP
GNPGFPGEMGLPGLPGYGPQGVRGVKGSKGLPGPQGLPGEAGLKGETRRIAPLPALPGPQ
GPDGLPGPPGVPGRIGTSGQPGDVGHPGPTGDTGFPGLGFPGNPGPKGDKGLPGSRGAPG
CEGKIGEPGRAGNLGQPGEKGDPGIIIPGEPGKLGSPGGRGIPGPKGDTGFPGLPGLPGQ
AGRDGNSGLRGDPGSSGVPGDPGFPGKPAECLTGLPGLPGAQGATGSPGRRGSLGSKGKL
GPPGLGIPGIDGKPGEPGLIGLLGNTGLPGLKGQSGRPGVFGVPGPRGEPGIMGPLGIPG
PPGRIGSPGNPGIRGSFGSPGLKGRKGFLGAQGEPGDKGFPGPSETLVVIGNKGEQGSKG
VQGRMGLKGEKGDAGVQGSPGLIGSEGVPGVPGVKGFMGLPGIPGGQGFPGAPGNKGNMG
IPGQKGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGHPSPGLPGEPGPKGDPGAPGALGR
KGEKGSQGQPGHKGAPGLPGFRGETGVAGNPGRLGLPGDVGVKGQQGHPGQQGVTGPPGA
AGYPGENGLAGERGNQGQDGMPGAPGLKGEPGAPGRGIPGLQGVPGRRGVKGDMGLPGFP
GPPGMKGHQGDQGPIGPPGLMGLPGFQGATGMAITGPKGNRGIPGADGRPGIPGFQGLPG
LPTMSIKGSKGVRGADGIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGFPGVKGE
KGNQGPPGPRGAEGPMGPKGQPGPPGVSGRIFSVPGSKGPPGLPGIPGTPGDQGIQGIPG
LQGPKGVKGLPGSFGRPGQPGQPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGTTTTGP
TRRGFIFTRHSQSTKIPSCPPGTSQIYIGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMP
FLFCNTNDVCSFASRNDYSYWLSTATAMPVDMAPISGKALEPHISRCIVCEGPAMVIAVH
SQTTAVPACPGGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGT
CNYYTNSYSFWLASLNPRRMFRKPMPQTLKAGELENVISRCQVCMKRPV
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggcgggcggaggctgcccacagcgcctggcgctgctgctgctgctcgccctgccgtgg
ccgggccgcgccgcggctgagaactgtgtatgcaaaggaaaaagcccctgcttttgtgat
agcgtgaaaggcaataagggtgaaaaaggcttccctggtgttccagggccacctggtcat
agaggctttccaggtccagaagggcctccaggaccacagggaccaaagggttcaccagga
cctgtgggcttggctggacccaaaggtatacgaggagtcccaggaatccctggattttca
ggtccgccaggccttccaggtgaaccaggaattgctggccaccctgggcgctcaggtgtt
ccaggttgcaatggcacaaagggtgatcggggtttcccaggtcctccaggtagaagaggt
gctccaggcattccaggtattgctggcatcaaaggagataaggggtgccctgcagatgga
tatgaccaaggatatggtgcaaaaggtgatcctggattgccaggaatgcctgggcatcag
ggtgctcagggtgttcaaggatatcctggggaaactggaccacggggccttccaggaact
tctggaataccagggagaccaggacctcctggacctaagggtcttatgggaatgaaagta
ataggaaccaaaggaagaaagggagacactggattaactggacctcctggaccaccagga
actgttattgttacattaagtggaccagacaacatgacggacttgaaaggagagaaagga
gaaaaaggatcaagaggacttccagggccaatgggatttacagggccaactggtgattct
cagagtgaaaagggtgaccaaggagaacctggagcacagggtaaacctggtaaagaaggt
gctccgggtctacctggattaccgggacaaaatggtgaacagggcaaaccaggactggct
ggtagacaaggagctaagggtgtaaaaggaaacactggtccacctggagcttgtggtcaa
acagagtattatgacgtagttggtgaaaaaggagatgcaggacctcctggacctccagga
cccaaagggcaacgtggcatgcctgggccacagggtcctcctggagatgctggtagacca
ggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggaacaaag
ggagaaaaaggacaggtgggctcgtgtattataggccctccaggactgcctgggattact
ggcagaattggttctgttgggttgccaggtcctccgggagaaccaggtagagtaactttt
agaacaggcctaccaggactccctggacagccaggttgtgcaggacctccaggacctcca
ggagacatgggcatgaaaggtgatgaagcttgcatgtgtactgattgcagctatattccg
ggaacgcctggtctccctggttctcctgggccacgtggccaggatggcatccctggtaga
gaaggagcgccaggtcccaaaggagctccaggttctccaggtgcaccagggtttccagga
gctcaaggacctccaggttttaaaggagatcaaggacgtaagggctcaaaaggtgagcca
gggtatgtgtatccagagggaccaaaaggggagcaaggagatccagggcccaggggagac
aaagggagaaaaggatcaagtggatttctgggaagacctggctctaaaggttacaaaggt
tctaaaggtgaagagggattggctggttcaaaaggagatagaggacaacctggattgcct
ggtaaccctggttttcctggagagatggggcttcctggactgccaggatatggaccacaa
ggagtaagaggtgtcaaaggctctaaaggactgcctggtccacagggattgcctggagaa
gctggtctgaaaggagagaccagaaggatagctccattgcctgcattgccaggacctcaa
ggaccagatggcttacccggacccccaggagtgcctggtaggattggaacaagtggtcag
ccaggtgatgtggggcatccagggccaacaggtgacacaggcttcccagggcttgggttt
cctggaaatccgggcccaaaaggagacaaaggacttcctggaagcagaggggcaccaggt
tgtgaaggaaagattggagagccaggccgcgctggaaatctaggacaaccaggagagaag
ggtgacccaggcataattattccaggagagccaggcaaactaggttcaccaggaggtcgt
ggcattcctggcccaaaaggtgatactggatttccaggacttccaggcttaccagggcaa
gctggacgtgatggcaatagtggcctaagaggagatccaggctcatctggtgttcctggg
gatccaggttttccagggaaaccagctgaatgtcttactggcctgccaggtttgccaggt
gcccagggagctacaggctcaccaggaagaagaggttcactaggttctaaaggcaaacta
ggtcctcctggtttgggtatcccaggaattgatggaaagcctggggaacctggattaata
ggtctcctgggaaacacaggattacctggtctcaaggggcagtctggaaggccaggagtc
tttggtgtgccaggccctagaggagagccaggtataatggggccgttaggaattcctgga
ccccctggcaggattggaagtccaggcaaccctggtatcagaggttcttttggctctcca
gggctaaaaggaagaaaagggtttcttggagcacaaggcgaaccaggtgacaaaggtttt
cctggaccatctgaaaccttggttgtgattggaaataaaggagaacaaggctcaaaagga
gtccaaggaagaatgggcctaaaaggagaaaaaggagatgcaggtgtccaaggttcccca
ggtcttattggatctgaaggagtacctggtgtaccaggtgtcaaaggatttatgggtctt
ccagggattcctggaggacaaggatttcctggtgcaccaggaaacaaagggaacatggga
attccaggtcaaaaaggacagaagggatctcccggctttccaggaacttcgggtgaccct
ggtccaacaggctatggtggctttccgggtgaaaaaggagaccctgggcacccatctcct
ggactcccaggagaacctggtcctaagggagatccaggggctcctggggccttgggcagg
aaaggagaaaaaggatcccaaggtcagccaggacataaaggagcaccaggactacctggg
ttcagaggagaaacaggagttgctggaaatccagggagacttggacttcctggagatgtt
ggtgttaaaggacagcagggccacccaggacaacagggtgttacaggccctcctggtgct
gctggataccctggagaaaatggacttgctggtgaaagaggtaatcagggtcaggacggt
atgccgggtgccccaggactaaagggagaaccaggagcaccagggagaggaatccctggc
cttcaaggtgttcctggtcgtagaggagtcaaaggggacatggggctgcctggatttcct
gggccaccaggtatgaaaggtcatcagggtgaccaaggacccattggacctcctggctta
atgggattacctggatttcaaggagcaacaggcatggcaattactggcccaaaagggaat
agaggcattcctggtgcagatggaagaccaggtattcctggttttcaagggctgcctggt
cttcccactatgagcataaaaggaagcaaaggtgttaggggagcagatggcatacaagga
ccaatgggcccagctggtgacagtggtcctccgggtccaaaaggagtagaaggtcggcca
ggttatcctggtgctagaggggatcctggctttcttggatttccaggtgtaaaaggagag
aagggtaatcaaggaccacctggaccacgaggggcagaaggaccaatgggaccaaaaggc
caacctggtccacctggtgtctctgggagaatattctctgtccctgggagcaaggggcct
cctggactgccaggaatcccaggcacaccaggtgatcaaggaattcaagggattcctgga
ttacaaggacctaaaggagtaaaaggtctaccaggaagttttggtcgtccaggtcaacca
ggacagcctggtccaaaaggagacaggggatttccaggacaaagagggcaacctggattg
attggcttccctggcctacagggattgcctggatcaccaggtactaccaccactggccca
acaagaagaggttttatcttcactcgacatagtcaatcaacaaagattccttcatgccca
cctgggacatcacaaatctacattggctattcactgctttttgtacaaggaaatgaacga
gcgcatggacaagaccttggaacagctggtagctgcttgcagagatttaccaccatgccg
ttcttattctgcaataccaatgatgtgtgcagttttgcttctcgcaatgactattcatac
tggctgtcaactgcaacagcaatgccagtagacatggcaccaatttctggtaaagcacta
gagccccatataagcagatgcattgtctgtgaaggacctgcaatggtaatagcagttcac
agccaaacaactgcagttcctgcatgtccaggaggctggatatctctctggaagggattt
tcttttgttatgtatacaagtgctggctcagaagcttctggccaagcactggcatctcct
ggatcttgtctggaagaatttcgagccatcccattcatagagtgccatggcagggggacg
tgcaactactacacaaactcctacagcttctggttggcatcactaaatccaagaagaatg
ttcaggaaacctatgccacagacattgaaagcaggagaactagaaaatgtcatcagccgt
tgtcaggtctgcatgaagagaccagtctaa

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