Tympanuchus pallidicinctus (lesser prairie-chicken): 128082553
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Entry
128082553 CDS
T08967
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128082553 (TRPC1)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128082553 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
128082553
NCBI-ProteinID:
XP_052542723
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVVEWWCSVLLWLDSRELCVFWKLMEHIQNPEYSTTMDVAPVILAAHRNNY
EILTMLLKQDISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEED
PILRAFELSADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSD
EHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKIL
TVLMVGIFWPVLSLCYLIAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENK
KNTMGPALERIDYLLIIWLVGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFAL
KVVAHNKFHDYAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQ
MLQDFGKFLGMFLLVLFSFTIGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTC
FALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQL
IANHEDKEWKFARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKV
KRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKF
RNEMRDLLGFRTSKYAMFYPRN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgtaccagagcgcggacccgtccgcttcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaagagaccacgctagacgagaagcttttcctg
ctggcctgcgacaaaggtgattattacatggttaagaaactcttagaagaaaacagctcg
ggtgagatgaacataaattgcgtagatgtgcttggaagaaatgctgttaccataaccatt
gaaaatgaaaatctggacatactgcagcttctcctggattatgggtgccagtcatcagat
gcacttttggtggctattgactcggaagtggtgggagctgttgacattctactgaatcac
cgaccgaaaagatcctccaggccaaccattgtagttgagtggtggtgttctgtgctttta
tggttggacagtagggaactgtgtgtgttctggaaactaatggaacacattcagaaccct
gaatactcaacaaccatggatgtggcacctgtcatcttagctgctcatcgcaataactat
gaaattctcaccatgctgttaaagcaagacatatcattacccaagcctcatgctgtaggc
tgtgaatgcacactctgtactgcaaaaaacaaaaaagacagtctgcgacattccaggttt
cgtcttgacatctaccggtgtttggccagtcctgctctaataatgttgacggaggaggat
ccaattctgcgagcttttgaacttagcgcagacttgaaagaattaagtcttgttgaggtt
gagttcagaaatgattatgaggagctagctcagcagtgcaaaacctttgctaaagactta
cttgcacaagcaaggaattcacgggagctggaagttattctgaatcatacatctagtgat
gaacatgtagacaaacgagggttactggaagagaggatgaacctaagtcgcttaaaactt
gcaatcaagtataatcagaaagagtttgttgctcagtctaactgtcagcagtttctcaat
actgtgtggtttggacagatggcaggctatcgacgcaagcacacgtgcaaaaaaattttg
actgttttgatggttggcattttctggccagttctgtccctgtgttacttgatagcacct
aaatcacgagtgggtcgtataattcacactccgtttatgaagtttattattcacggagct
tcgtatttcacatttcttctgctactgaatttgtactctcttgtctacaatgagaacaag
aagaatacgatgggaccagcccttgagagaatagactatctgctgataatatggctagtt
ggaatggtgtggtcagatgttaaaagactctggtatgatggtttagaagactttttagaa
gagtcacgtaatcagcttagttttgtcatgaattccttgtatttggcaacttttgctctc
aaagtagttgcccataacaagtttcatgattatgctgaaagaaaggactgggatgcattt
catcctacactagtggcagaaggtctttttgcatttgctaatgttctgagttatctgcgt
ctgttcttcatgtacacaaccagctctattctgggaccactccagatttcaatgggacag
atgctgcaagattttggaaaatttctgggcatgttcctcctcgttttgttctcgttcaca
attggattgacacaactttatgataaaggatttactgtaaatgaagaagaaagggactgt
gcgggtattttttgtgaaaagcagagcaacgacacgttccattcgttcattggcacgtgt
tttgctttgttctggtatattttctcactggcacacgtagcaatctttgtcacgcgcttt
agctacggtgaagaattacagtcttttgtgggtgctgttattgttggcacctacaatgtg
gtggttgtgatagtactaactaaactcctcgtggcgatgcttcataagagttttcagctg
atagcaaatcatgaagataaggaatggaaatttgctcgtgccaaactttggcttagctat
tttgatgacaaatgcactctacctccacctttcaatgtgattccatctcccaagactatc
tgttatctcttcaacagtctcagtaaatggatttgctctcatacatcaagtggcaaagtg
aaacggcagaacagccttaaggaatggagaaatctgaagcagaagagagatgagaattat
caaaaggtgatgtgttgcttagttcaccgttatttgacatccatgaggcaaaagatgcaa
agcacagatcaggcaactgtggaaaacctaaatgagctgaggcaagacttatcaaaattc
cggaatgaaatgagagacctacttggctttcgaacttcaaaatatgctatgttttatcca
aggaattaa
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