Tympanuchus pallidicinctus (lesser prairie-chicken): 128082678
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Entry
128082678 CDS
T08967
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128082678 (TDRD12)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
128082678 (TDRD12)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128082678 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
128082678
NCBI-ProteinID:
XP_052543061
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MEVFVLRIEDPGCFWVTMKGCGPHVVDEIEYKKLNAEMNQFYDKACEDEVKPITLEKDQL
CVVFSKELKCWCRAVVKTIMHCADHYQIECFLVDYAKYVFVKSKHVRVAVEEFMQIPFRA
KKCGLYRTKPVTLHVNLCEDTAKIVPAKRWDNAATRYFQSLLEATTQIKAKLCSVEDDTF
HVILYVTVEDEKVCINDDLVLKKFAHFEEAKENVHSPTKEQDNQTSLNVDSPPVEIVNPA
LAFRLVWLQEKVPMKLEAGHTASSSSLEKTYKRSNMDLNENNEYTSQNLREERSFVFLSN
KIEPTSILEKAPLHDNLKKELAQDKFLGPNFAESYSWPAIARGCDVLTISYQGNDPFLYI
PPVLTFLQMENCYKALPKRSGPLVLILCPGWRKAQLVFELLQKYSRCSRLSCPMLIILGK
KREEAETVKIQGREIIVTTPYSLLRLYKYHLSLFSGLCHLILDEIEVLFSEAAEQVSVIL
GYYKKNLVNEEWKYSPHQIIAVGTQWNKHIGILIKEFMNDPYIVITALEEASIYGNVQQV
VQHCVSSERTAVLLKIMDFTPNNLQKVLVFTNSIDEVEIVYQALKSDSVFVFKIHKEMEF
NFKDFLEHWTRSYSSGSHVVLVLTDDCMQFLEITDASCVIHFSFPSSPTIFGQRLHSMSD
NFHSMIKESSDQDHRQARSVIMLTENSECHTVGILRYLERAEADIPPGLAGVLEAEEKKK
FARPLCTYLKMFGTCKNRTVCPDRHQINSQIDMLQNMASKTIQTSGYVTVLPLHVVNATN
YFGRIVDKQKDQYMILAEEINEYFKETSNRVAAQKVEKLALYGFCEETVFHRVQVVETSS
KEEGNFNIKIKYVDEGRTSQAQSSQLLHLPARFQHLPPQAVEFVVCRVKPIDNDTEWNPR
VTRYIHQKIERKPHEAKVVLTLGNTVWIDPMVRVTRLSDLKMYVNEYSVRSEILSTGLGT
DNPEHILQLQKLCEHVKLSHTKNLEPLSIKEDAASPENVSALQDVSLKENSSENCNSSKV
TMGSHLCDGVAQTKEAEDSSLHQQKCFYPKIKWFENEEAVTVKVRIARIADYKCEFSKEK
VIFSACSEGRFYLADMELYQCILTEKSACVIKDKEAIIVLRKEKKGAWCKLLKNKNPHVS
FDFEYWEDDEDKSPFPVGTKKLHCTAAVTEELVDFSEDSGAESDE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttcgtattacggattgaagatccaggttgcttttgggttactatgaaagga
tgcgggcctcatgtagttgatgaaatagagtataaaaagctgaacgcagaaatgaatcag
ttctatgacaaagcttgtgaagatgaagtaaagccaataacattagaaaaagaccagctt
tgtgtggttttcagcaaggagctgaagtgctggtgtagagcagttgttaagacgatcatg
cactgtgcagaccattatcaaatagaatgttttctagtggattatgcaaagtatgttttt
gttaaatcaaaacatgttcgagttgcagtggaagaatttatgcaaatcccatttagagca
aaaaaatgtggattgtatcgcacaaagcctgtgaccttgcatgtcaacctctgtgaagat
acagcaaaaatagtaccagccaaaagatgggataatgctgctacgcggtattttcaaagt
cttctggaagcaactacacaaatcaaagcgaagttatgttctgtggaagatgatacattt
catgttattctttatgtgacagtagaagatgaaaaggtatgcattaatgatgatcttgtc
ttaaagaagtttgctcattttgaggaagctaaagagaatgttcacagtccaacaaaagaa
caagataaccagacatctttaaatgttgattctcctccagtagaaattgttaatccagca
cttgctttcaggctagtgtggttgcaagagaaggtaccaatgaaacttgaagcaggccat
actgcttctagttcctctcttgaaaagacatacaaaagatcaaacatggatctcaatgaa
aataatgaatatacatctcagaaccttagagaagaacgaagctttgtctttcttagcaac
aaaattgagccaacttcaattttggaaaaagcaccacttcatgataatctgaaaaaggaa
cttgctcaggataagtttttaggccctaacttcgcagaatcttactcttggccagcaata
gctcgaggatgtgacgtacttaccatctcctatcaaggaaatgaccctttcttatatatt
ccaccagttcttactttcttgcaaatggaaaactgctacaaagccttgccaaaaagaagt
ggaccactggtgcttattttatgtcctggttggaggaaggcacagcttgtttttgagtta
ctgcaaaaatacagcagatgctccagactgagttgtccaatgttgataatacttgggaag
aaaagagaagaagctgaaacagtgaaaatccaaggacgtgaaataattgtgactacaccg
tacagtctcctgagattgtataaatatcacctttccttgttttctggactttgccatctt
attttggatgaaattgaggtactattctctgaagctgctgaacaggtttctgttatacta
ggttactacaagaaaaatctcgttaatgaggaatggaagtactcaccacatcaaattatt
gctgttggaactcaatggaataagcatataggaatcttaataaaggaattcatgaatgat
ccttacattgtgataacagctttggaagaagcttccatttatggaaatgtgcaacaggtt
gtgcagcattgtgtgagcagtgagagaactgctgtgttactcaaaataatggattttact
cctaataatcttcagaaggtgctggttttcactaattccatagatgaagtagaaatagta
tatcaggcactgaagagtgactcagtatttgtcttcaaaatacataaggaaatggagttt
aatttcaaggatttcttggagcattggacaagaagctatagcagtggcagtcatgttgta
ttagttctaacagatgactgcatgcagttcttggagattacagatgcgtcttgtgtgata
catttcagttttccttcttctccaacaatcttcggtcagcgtctacacagcatgtctgac
aacttccatagtatgataaaggaatcatctgatcaggaccatcgacaggcaaggtcagtc
ataatgctaacagaaaacagtgagtgccacactgttggtatcctgcgctatttggagcgt
gctgaagctgacattccaccaggattggctggagtgctagaagctgaagaaaagaagaaa
tttgcaaggccattgtgcacctatcttaaaatgtttgggacttgcaagaatagaacagta
tgtccagatcgtcatcaaattaattcacaaatagacatgctccagaatatggcatctaaa
actatacaaacatctggatatgtgacagtgcttcctctccacgttgtaaatgcaacaaac
tactttggtcgtattgtagataaacagaaggatcaatatatgattcttgctgaagaaatc
aatgaatattttaaggagactagtaatagagttgctgctcaaaaggtagaaaaactagct
ttgtatggattctgtgaggaaacagtctttcacagggtccaggtggtagagacttcttca
aaagaagaaggaaattttaacatcaaaatcaaatacgtagatgaaggcagaactagtcaa
gctcagagctctcagcttcttcacttacctgcaagatttcagcatctgccacctcaagct
gtggaatttgtagtttgtagagttaaacccattgataatgacactgagtggaacccaagg
gtgactcgttatattcatcagaaaattgaaaggaaaccacatgaagcaaaggtagtactt
actctaggaaatacagtttggattgacccaatggtccgggttaccaggctttcagatttg
aagatgtatgtcaatgaatacagcgtgcgatccgagattttgtctacaggtctgggaact
gataatccagaacatatattgcaacttcagaagttgtgtgagcacgtgaagttaagtcat
acaaagaatttggagcctttaagcataaaggaggatgcagctagtcctgaaaatgtgtct
gcgctgcaggatgtgtccctaaaggaaaattcttcagaaaactgtaattcttctaaagtg
actatggggagtcatctgtgtgatggtgttgctcaaactaaggaagcagaagactcttca
ctgcatcagcagaaatgtttctatccaaaaataaaatggtttgaaaatgaagaggctgtt
acagtgaaggttcgaatagcaaggatagctgactacaaatgtgaattctccaaggaaaag
gtaattttcagtgcctgctcagaaggcagattttacttggccgatatggaattgtatcag
tgtatacttacagaaaagtctgcgtgtgtgattaaggataaagaggctattattgtcctc
agaaaagagaaaaaaggagcatggtgcaagttactaaagaacaagaatcctcatgtgtct
tttgactttgaatactgggaagatgatgaagacaaaagcccttttccagttggtactaaa
aagctgcattgcactgctgcagtgacagaagaactggttgacttttcagaagacagtggt
gcagaaagtgatgagtaa
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integrated database retrieval system
