KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128082716
Entry
128082716         CDS       T08967                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tpai01009]
    128082716 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpai04121]
    128082716 (TRIM42)
Protein phosphatases and associated proteins [BR:tpai01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128082716 (TRIM42)
Ubiquitin system [BR:tpai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    128082716 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Ig_DSCAM-DSCAML_C Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 128082716
NCBI-ProteinID: XP_052543124
LinkDB
Position
Unknown
AA seq 733 aa
MDENGCTFSACPCFSNCCYLTCHRRKKECCLCWRFLFTSEQNCSCFPCPYEEDKPYQCCH
CSCSEHANCWWCCCSCSNDPDCKCCCCGGENSACQYYASKCCGKSVYDQQQSRAPGTVQL
TDVMSRLRTRNKARVSVPERKGSNQAFRDQLACPLCKQLFLQPFMLPCNHCICEKCIIKT
KTKAEATDNYYIIICPVCNKAHCLPNTNKIQLRKNYLKAKLAKKYMRRHGILKWRFDHSE
RPVYCETCRERRRVATKRCRTCGINMCSECLHLYHTESGVQDHIFTSTCQEDNEQWACLL
HCNSHLSEYCLDDHKLICGFCKNSLHSDHETIPLAAACSREAASLSNTIVKFKQARQGID
NDLMEVTLLKNNFQASKDLQRKEIRNGFLKLHTVLHEQEKEMMELLENTELKKQKDISEY
VNYTFSQLSYMDGLIQYAEEALKEESQVVFLQSAHCLVKEIEDAIPSIFQPSPHIREDPL
RKLQFKFDELFAILQGFSPTLSETKQLESKGEKHPYSFNPEIMVPRHVSSIHEAKQSTML
QSASLNSLLELGMPIESTLGRPNSTPPHHSTQSNKMCAFWDAACETSRKERKYQIVNFPS
SEPMEKESFPAPGPVVIYQTVVYPRSAKIYWTCPIEDVDFFEVEFYEVVGIGPDNTVCTQ
LDGKLSKIQQQNLEIRNLDSNTEYLFKVRAVNKSGQGEWSESCKIITSGEHKIIQDRWRT
ENSMQGTQQTLKR
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggatgaaaatggatgtaccttttcagcctgcccatgcttctcaaactgctgttatcta
acttgccacagaagaaagaaggaatgctgcctgtgttggcgcttcctatttaccagtgag
cagaactgcagctgtttcccatgcccgtacgaagaagacaaaccttaccagtgctgccac
tgctcatgttcagagcacgcaaattgctggtggtgctgctgctcttgctcaaatgaccca
gactgcaaatgctgctgctgtggtggagagaattcagcatgccaatactacgcaagcaaa
tgctgcggaaaatctgtctatgaccaacagcagtcaagagcaccagggactgttcagtta
acagatgtcatgtcaagattaagaactagaaataaagcacgtgtgagtgtaccagaaagg
aaaggctccaaccaggcttttcgtgatcagcttgcctgtccactgtgcaaacagttattt
ctccagccgtttatgctgccatgcaatcactgcatttgtgagaaatgcataataaaaacc
aagaccaaagctgaagcaacagataactattatatcatcatatgcccagtatgtaacaaa
gctcactgtctccctaacacaaacaaaatccagctgaggaagaattaccttaaagcaaaa
ctggccaagaaatacatgcgcagacacggcattctgaaatggagatttgaccacagtgaa
agaccagtctattgcgaaacttgcagggagagaagaagagtggcaactaaaagatgtaga
acatgtggaattaacatgtgcagtgaatgtctgcatttatatcatactgagagtggtgtt
caagaccacatattcaccagcacgtgtcaagaagataacgaacagtgggcctgcttactg
cactgcaactcacacctctcagaatactgtctggatgaccacaaactgatctgtggtttc
tgcaagaattcgctgcacagtgatcatgagaccattcccttggcagctgcatgttcaaga
gaggctgcttctctctccaatacaattgtaaaatttaaacaagcacgccaaggaattgat
aatgatctaatggaagttaccctgctaaaaaataatttccaagcctccaaggatctccaa
aggaaggagatcagaaatggattcttaaaactacatacagtgctacatgaacaagaaaaa
gagatgatggagttgcttgaaaacaccgaacttaaaaaacagaaagacatttcagaatat
gtaaactatacattcagccagctctcatatatggatggccttatccagtatgctgaagag
gctcttaaagaggaaagtcaagttgtatttctgcaatctgcacactgtttggtgaaagaa
atagaagatgcaattccttccattttccagcctagcccacatatccgagaagatccctta
aggaaactgcaattcaaatttgatgaactgtttgccattttacagggattttcaccaacc
cttagtgaaacaaaacagttagaaagtaaaggagagaagcatccctattcttttaaccca
gaaataatggttccaaggcatgtttcaagcattcatgaagccaagcaatcaacaatgctc
caaagcgcatccttaaattccttgcttgaattaggcatgccaattgaaagcactcttggg
agaccaaactctacacctccccatcattctacacagagtaataaaatgtgtgcattttgg
gatgcagcttgtgaaacttcaagaaaagaaaggaaatatcagattgttaactttccaagt
tcagaacctatggaaaaagaatcattcccagcgccaggacctgttgttatataccagact
gttgtttacccaaggtctgccaaaatttactggacttgtcctatagaagatgtggatttc
tttgaggtagaattttatgaagttgttggtattggtcctgataacactgtctgcacacaa
ctggacggcaagctaagcaaaatacagcagcagaaccttgagatacgtaatctggattca
aatacagaatatcttttcaaagtccgtgctgtcaataaaagtggtcaaggagaatggagt
gagagctgtaagataattacttcaggtgaacacaagataatccaagacagatggaggact
gagaatagtatgcagggtactcagcaaacactgaagagatag

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