Tympanuchus pallidicinctus (lesser prairie-chicken): 128082726
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Entry
128082726 CDS
T08967
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128082726 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128082726 (DHX36)
03012 Translation factors [BR:
tpai03012
]
128082726 (DHX36)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128082726 (DHX36)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128082726 (DHX36)
Translation factors [BR:
tpai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128082726 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
AAA_23
PhoH
Motif
Other DBs
NCBI-GeneID:
128082726
NCBI-ProteinID:
XP_052543145
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MSYEQRRDWGRGRGRGGDGGSSGGGGPGGRGGGRGRHPSHLKGREIGLWYARKQGQKSKE
ADRQQRAVVRMDERREEQIVQLLNAVQPRAEKEQEAMSWWSGDEDGHTPEQPPKVKPGAE
KAEKAPVKRRPVLEKTLLDQDVEYLFEKSDQDANLDEQLKEDLRKKKSDPRYIEMQRFRE
KLPSYGMRQELVNLINNNRVTVISGETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPR
RISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDNCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKGFMQGHISRPEKEEKEEIYRERWPE
YLRQLRGRYSASTIDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISSLH
DLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARR
KELSKNTKSDHLTVVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHL
LAAGFVNSRDPKDPKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
TVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVNWDDTKCRDTAVLTAIID
LITTQENESARNFAPRFQSERYS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccgcgactggggccggggtcggggccgcggcggcgatggcggc
tcctccggcggcggggggcccgggggccgcggcgggggccggggccgccatcccagccac
ctcaagggccgcgagatcgggctgtggtacgcgcggaagcagggccagaagagcaaggag
gcggaccggcagcagcgcgccgtggtgcggatggacgagcggcgggaggagcagatcgtg
cagctgctgaacgccgtgcagcccagggccgagaaggagcaggaagccatgtcgtggtgg
tccggggacgaggacggacatactccagaacagcctccaaaagtgaaaccaggtgctgaa
aaagctgaaaaagctcctgtaaaacggcgaccagtcttggagaaaacacttcttgatcag
gatgtggaatatctctttgagaaaagtgatcaagatgcgaatttagatgagcagcttaaa
gaagacttgagaaagaagaaatctgatcctagatatattgaaatgcagagatttcgagag
aaactcccttcatatgggatgagacaggaacttgtaaacctcataaacaataatcgagtg
actgtaataagtggtgaaaccggctgtggaaagacaacacaagtgacacagttcatcctg
gacgattacatagagcgagggaaaggctccacgtgcagaattgtttgtactcaacccagg
aggatcagtgctatctcagtggctgagagagttgcagctgaaagggcggaagcatgtggt
aatggcaagagtacgggataccagattcgtctacagagtcggttaccaaggaaacaaggt
tcaattctgtactgtaccacaggaattgtccttcagtggctccagtcagataagcatttg
tccagtattagtcatgtagttcttgatgaaattcacgaaagaaatctccaatcagatgtt
ttaatgagcattataaaagaccttttgaatgttcgcttggatctgaaagtaatcctaatg
agtgctactttaaacgcagagaagttttcggagtattttgataactgtccaatgattcac
atacctgggttcacttttcccgtggtggaatacctccttgaagatgtaattgagaagttg
agatacactccggaaaacacggaccgtcggccacggtggaagaaaggtttcatgcaaggc
catataagcaggccagaaaaagaagaaaaagaagaaatctacagggaacgatggccagaa
tatttaaggcagctgcggggcaggtattcagcaagtactatcgatgccttggaaatgatg
gatgatgacaaagtagaccttgacctaatagcagcacttatcagacacattgttctggaa
gaagaggacggtgcaattctagtgtttcttccaggatgggacaacatcagctctctgcat
gatctcttgatgtcacaagtcatgtttaagtcggataggtttattatcatccctttgcat
tccttgatgcctacagttaaccagactcaggtgtttaagaagaccccgccaggagtcagg
aaaatcgtgattgctaccaacattgcagagaccagcattacaatagatgacgtggtgttt
gttatagatggtgggaaaatcaaggaaacccactttgacacacagaacaacatcagcaca
atggctgcagagtgggttagcaaagctaacgccaagcagaggaagggtcgagcaggaaga
gtgcagccaggccactgttaccatctgtacaatgggctgcgtgccagcctgctggatgat
tatcagttaccagagatcttgaggacacctttggaagagctctgcttacaaatcaagatt
ctaaagcttggtggaattgcttattttctgagtaaactcatggatccaccatctcgtgat
gctgtaatgctggccattaatcatctgatggagctgaacgctttggacaggcaggaggag
ctgactccgctcggcgtacatctggcacggttaccagttgaaccacatattggaaaaatg
atcctctttggagctttgttctgttgcttggatccagtacttacgattgcagcaagcctt
agctttaaagatccttttgtcattcctctgggcaaagagaaagtggcagatgccagaaga
aaggagctgtcgaagaatactaaaagtgatcatctgactgtggtgaatgctttcacaggc
tgggaagagactcgtcggcgtggattccgaactgagaaagactattgctgggaatatttc
ctgtctccaaatactctccagatgctgcataacatgaaaggacaatttgctgagcatctg
cttgcagctgggtttgtgaacagcagagaccccaaggatcccaagtctaataccaactca
gataatgagaagttgctcaaagctgtcatctgtgctggcttgtatccaaaagttgcaaag
atccggccaagctttagcaaaaagaggaaaatggtgaaggtttgcaccaagacagatgga
acagtgaatattcatcctaaatctgttaatgtggaagaaacagagttccattacaactgg
ctggtgtaccacttgaagatgagaaccagcagtatctacctgtatgattgtacagaagtg
tctccatactgtctgctgttctttggaggagacatatccattcagaaggataaagaccag
gacaccattgctgtggatgaatggatagttttccagtctccggcaagaatagcacactta
gttaagaatttaagacaagagctcgatgatcttctccaagagaaaatagagaacccccac
cctgtgaactgggacgacactaaatgcagggatacagcagtactgacagccattatagac
ttaatcaccacccaggagaatgaaagtgccaggaattttgctccgcgattccagagcgag
cgctacagctga
DBGET
integrated database retrieval system
