Tympanuchus pallidicinctus (lesser prairie-chicken): 128082948
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Entry
128082948 CDS
T08967
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128082948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128082948
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
128082948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
Rad17
AAA_22
AAA_23
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
128082948
NCBI-ProteinID:
XP_052543626
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MRRRQRNLSVFQQTKILLWKNVLIKWRMKMQSFQEWMLSLLFLPLMFIVSNFMMYIPYPE
VPHSHLGQLDDPAYNATGVTIAFTPVTAATRHIMNTVASKSVMTGIKLEALDTERALEEA
WILNKEIIGVVFKNNFSYHLRFSAENVVFPNENLEYIDTCYNYSEPYCESPKYWYQGFLS
LQSSIDAAIIEVVANHSVWEEMRTIAGVRAKSRSVISSITLEYIYFMITIVMCFSSFMYF
LSVNVVREKKQLKVLMKLMGLHDMAFWLSWSLLYAIYVLILSCLLTALVVQESFYTSSFS
AILLLFFLYGLACVHLVFMLCSLLRTSKLVGSLGFLITFLFGCLSLSVLIENLPEPLKWF
LSLFCPFAFNVGIAKIFSLERYGIGFSFSNIMEESYFLLSTYIILTFDSVLYMLLAVYFD
KVLQGKYGIPAPPLFCLKPSYWMRSRRGFPGEGHRGAGSLEEPSGDDVELVPLEFRGKEA
IRLHNIKKTYKKKDKKTEALRGLTLNIYEGQITALLGHSGAGKTTLLNVLSGLTLPSEGS
ATIYDYKLSEIGDREEIREMVGVCPQFNAQFEVLTVKENLQTFAEIKGIKSKEVEREVQN
MLELLDISSVQDTQAEKLSGGQKRKLSIGIAMLGNPQVLLLDEPTAGLDPLSRHQVWSLL
KEHRDGRVILFSTQFMDEADILADRKAFISCGRLKCVGSSLFLKKKWGIGYHLRIHVSDS
CDVEKVTSLVKQYIPSVMLLGHGQYELRYKLPLENVNKFPDLFRGLDSCSHLGLINYGVS
MTTLEDVFLRLEEAAVDQEDKCVPGERAEGGARSPEEMESGSLLLSDTERMTVSCWALWR
QQVSAVAWVRLLKFKSSVKNLLSILLLYVVFLLPLMLQVSLTTVWESMSAWELCSSRYFL
PLRTRAHADTTNLLVLNSTGSGIEDFIHALESQDLAVEITNKENITEELKYNGAIKVSRE
GQSYRFTIFCHMEAINCFPVLVNIISNALLRAFNSTAHIRIWSHPFHSTDNSQYWDSFVS
FYLIYMLLLFPGFPPHFAMGSLQDYKTGARAQLRVSGLFPSAYWCGQALVDVPFCWLLLF
SMFGLQFAISNGVSGTFSSFFLLIMNVFGYGVSIIFLIYFISSFFRKGWNCDFWSFILIV
VCLVTFIISRIMDYALELEISLYLLSLLIPMYPPLGLMLNIEEMFIEDSDLTEGFLNNNV
LIAVFAPYIHSVVFIFLLRYLEIKYGRPVLRKDPVFRIFPRKENSHQHPEEPEEEDEDVK
AEREAVKNAIAAPGQEEKSVIIVSNLYKEYKIEKAGSVFRKKKKMATRNISFCVKKGEVL
GLLGPNGAGKSTVIKMIAGETTPTAGQVLLRSRDATLCWTQDHVLAYLGHCPQEDPLWPD
LTVHEHLKVYAAVKGVHKEDIATAINRIVNALELQDYLKKPTRKLPAGITRKLCCAVCML
GNPSVLLLDEPSTGMDPNGQRCIWKVIRAALKTQETGAVLTTHYMEEAEAVCDRVAIMVA
GQLRCIGSIQYLKNKFGKGYVLEIKVKDPETTDLLHAEILRIFPSAARQERFPSLLVYKV
PMEDALPLSQSFSKLEEAKQNFNLEEYSFSLNTLAQVFLELSREQEKDNFDLTLDGPFEW
KQLQQEDS
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacgtcagagaaatttgagtgtgttccagcaaactaaaattctcttgtggaaa
aatgtgcttatcaaatggaggatgaaaatgcagagttttcaggagtggatgctgtccctg
ctcttcctgccactgatgttcatagtgagcaacttcatgatgtacatcccctaccctgag
gtgccacacagccacctggggcagctggatgatcctgcctacaatgccaccggagtcacc
attgctttcacacccgtcactgcagccaccaggcacatcatgaacacagtggcctcaaag
tctgtgatgacagggataaaactggaggcactggacaccgagagggccttggaggaagcc
tggattttgaataaagagattataggagttgtatttaaaaacaacttctcctatcacctc
cggttttctgctgagaacgtggtttttccaaatgaaaaccttgaatacatagatacctgt
tacaattactcagagccctactgtgagagccccaagtactggtaccaaggtttcctgtcc
ctgcagtccagcattgatgcagctattatagaggtggtggcaaatcattctgtttgggaa
gaaatgagaacaattgctggcgtgcgtgcaaagtcccggagtgtcatctcctcaattaca
ttagagtacatttatttcatgattactattgtgatgtgcttctcttcattcatgtatttc
ttatctgtgaatgttgtaagagaaaagaagcagctcaaagtattgatgaagttgatggga
ctacacgatatggcattttggctctcctggagcctgctgtatgccatctatgtgctgatc
ctgtcctgcctgctgactgccctggtggtgcaggagagtttctacaccagcagcttctct
gccatcctactgctgtttttcctgtatggccttgcatgtgtccacctggtcttcatgctc
tgctccctcctgaggacatccaaacttgtgggctccctggggttcctcatcaccttcctc
ttcggctgtctgagcctctcagtgctgatagaaaaccttccagaacctttgaagtggttt
ctcagcctcttttgtccttttgcattcaatgttggcattgcgaagattttcagtttggaa
agatatggaataggtttctctttttctaacatcatggaggaatcatactttttactttca
acctacattatactgacctttgactcggtcttgtacatgctgttagctgtctacttcgac
aaagttctgcagggaaaatacggcatcccagccccaccacttttctgcctgaaaccctcg
tattggatgcggagcaggaggggctttcctggggaaggacacagaggtgctgggagcctt
gaggagccctcaggagacgatgtggagctggtgcccctcgagttcagggggaaggaggcc
atcaggctccacaatattaaaaaaacatacaaaaagaaagacaagaagacagaagccttg
agaggtttgactttaaatatttacgagggtcaaatcactgccttgctcggccacagtgga
gctggaaagacaaccctgttaaatgtgctcagcgggctgactttgccttctgaaggctct
gcaaccatctatgactacaagctgtcagagataggagacagggaagagatcagagagatg
gtcggtgtctgcccacagttcaatgcgcagttcgaagtcctaacggtgaaagaaaatttg
caaacctttgcagagatcaagggcatcaaatccaaagaggtagagcgagaggtgcagaac
atgttggaactgctggatatcagtagcgtgcaagacactcaagctgagaaattgagtggt
gggcaaaaaaggaagttatccattgggatagccatgcttggaaacccgcaggtgctgctc
ctggatgagccaacggcgggcctggatcctctttcccgacaccaggtgtggagcctcctc
aaggagcacagagatggccgggtgatcctcttcagtacccagttcatggatgaggccgac
atcctcgcggaccgcaaggcttttatctcatgtgggaggctgaagtgtgttggctcctct
ttgttcttgaaaaagaagtgggggatcggctatcacttaaggatccatgtcagtgattct
tgtgatgtagagaaggtgacatctctggttaagcagtacatccccagtgtcatgctcttg
ggacacggtcaatacgagctgagatataaactgccattagaaaacgtgaataaattccca
gatctgttcagaggcctcgacagctgctctcacctgggactcatcaattatggagttagt
atgacaaccctggaggatgtcttcctgagactggaagaagctgcagtggaccaagaagat
aagtgtgtccctggggagcgggcagaaggaggagcacggagcccagaggagatggagtca
ggctccctgctgctctcagacactgagaggatgacagtcagctgctgggcactctggagg
cagcaggtctctgccgtggcatgggtgcgcttgctaaagttcaagagctcggtgaagaac
ctcctctccattttgttgctctatgtggttttcctgctccccctgatgttgcaagtgtca
ctgacaactgtctgggagagcatgagtgcctgggagctgtgctcatcacggtacttcctg
cccctgcggaccagggctcacgctgacaccaccaacctgctggtgctcaacagcacgggc
tccggcattgaggacttcatccacgcccttgagagccaagatctcgccgtggaaattaca
aacaaggaaaatatcacagaggagctgaaatacaatggggccattaaagtatctcgtgaa
ggccagagctacaggtttaccatcttttgccacatggaggccatcaactgcttcccggtg
cttgtgaacatcatcagcaatgctctgctgagagctttcaattccactgcacacatccgg
atctggagccacccttttcattctacagataattcacaatactgggattcctttgtctct
ttctaccttatctacatgctgctgctgttcccaggtttccctcctcactttgcaatgggc
tctctgcaggactacaagacaggagctcgtgcccagctgcgggtctcggggctcttcccc
tcggcatactggtgtgggcaggcactggtggatgtcccattctgctggctccttctcttc
tccatgtttgggttacagtttgcaattagcaacggagtgtctgggaccttcagcagcttc
ttcttgctgatcatgaatgtttttggctatggagtttctatcattttcttaatctatttt
atctcctccttctttcggaaaggatggaactgtgatttttggtcttttatcctaatagtg
gtatgccttgttactttcattatcagcagaatcatggattacgcactagaactcgaaatc
tcactctacctcctgtctctgctgatccccatgtatccgcccttgggcctcatgctcaac
attgaggagatgtttatagaagactccgacttaactgaaggcttcctaaacaacaacgta
ctcatagctgtctttgcaccttacatccattctgtggttttcattttcctccttcgttat
ttggagataaaatacggaaggccagttctgagaaaggacccagtattcagaattttccca
agaaaagagaacagccatcagcatcccgaggagcccgaagaggaagatgaggatgttaaa
gctgaaagagaagcggtgaaaaatgccatagcagctccaggccaggaggagaaatcagtt
attattgtcagtaatctctacaaggaatataagattgagaaagctggttctgtttttagg
aagaagaagaaaatggccaccagaaatatttccttctgtgttaaaaaaggagaagtgtta
ggactcctggggcccaacggagctggtaagagcacagtcatcaagatgatagctggagag
acaaccccgacggctgggcaggtgctgctgaggagccgagatgccacgctgtgctggaca
caggaccacgtgcttgcctacctggggcactgcccacaggaggacccactatggccagac
ctcaccgtgcacgagcacctgaaggtctacgctgctgtaaagggcgtgcacaaggaggac
attgccactgccatcaacagaatagtgaatgctttggagcttcaagactatttaaaaaag
ccaaccagaaaacttcctgctgggataaccagaaagctgtgctgcgctgtgtgcatgctg
ggcaacccttcagtcctgctgctggatgagccatcgactggcatggaccccaatgggcag
cgctgcatttggaaagtgattcgtgctgccctgaaaacccaggagacaggtgccgtgctg
accacacactacatggaggaggcagaggcggtgtgcgaccgcgtggccatcatggtagct
gggcagctaaggtgcattggctccattcagtacctgaagaacaagtttggcaaaggctac
gtgctggaaatcaaagtcaaagacccagagaccactgatcttctccatgctgagattttg
aggattttcccaagcgctgcccgtcaggagaggttcccctctttgctcgtctacaaggtc
ccaatggaagatgcactgcccctatctcagtctttctccaagctagaggaagccaaacaa
aacttcaaccttgaggagtacagcttctctttgaatactttggctcaggtctttttggaa
ctctccagagagcaggagaaggataattttgatctcactttggatggcccttttgaatgg
aaacaacttcagcaggaggacagttaa
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integrated database retrieval system
