Tympanuchus pallidicinctus (lesser prairie-chicken): 128082949
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Entry
128082949 CDS
T08967
Name
(RefSeq) ATP-binding cassette sub-family A member 9-like
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128082949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128082949
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
128082949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
Rad17
Motif
Other DBs
NCBI-GeneID:
128082949
NCBI-ProteinID:
XP_052543628
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MGRVASDSVLKGITIEEAVNEKNLSARGILKYDAIGVVFKDDFSYHLRFQSYRVISPVDA
FEHIDTCYNVSSPYCKIPSYWYGGFLSIQSSIDAAVIEMKTNRSVWEEMKSISGIRLQSP
LIKSIYKVNYIWFTIYSMLCFSPYVYFLSVKVIREKKKLKVLMKAMGLQDIAFWLSWSLL
YTIYIAITSSLLAAITVGEVTQDRSFSEIYFLYFFYGIASIHFCFMLSSLLKQPHITSFV
GFFLHIVFGSLGFMTLFEQVPPSLEWVFNLFSPYTFTAGISKIVKLEKYGPTVAMELYPF
FNQYSMLILDSILYLLLAIYFDKVLPGKYGVPYPPLFFLRPSYWLQQDSKCSTQPDPIPV
PGCDTEPMPEGFEGKEAIRLYNIRKIYERKGKRTEALRGLSFSIYEGQITALLGLSGSGK
TALLNVLSGFSKPSAGSAVIYNYKVSEVQDMEGIQAVVGICPQLDLHFEALTVKENLRIF
AHVKGIQWKEVEQEVQKVLVQLDLADLQDVHADSLSGGQKRKLSLAIAILGDPQVLLLDE
PMVGLDPCSRHHVWELLAERRAGRVTLICTQSVEEADACADRKAFLSNGRLQCVGSSLYL
KRKWGIGYHLRMCINDQCDPGLASSLVRRYIPNAVLKGRDRDELCYMLPLENTKSFPDLL
GHLDNGLLLGVVHYEVSRTTLADALLKLEGKEDIDHKENLKESDQNFLGFSEPAHTAASG
MELWRQQVLAVARVRFYRLRHDGKLLRSLLLFFGVFIIQMLMFFFGFNLWNKSISELTAS
KYFLPAQPPTQTQSKATNLLIFNDTGSEIEDFIAALKIQNIMPEITLEKNITSLPQHNGA
IKISLEGKAENPEAGRGIFFLSVAYMLIWAAGLPPHFAVSSVEDYKKKARAQLRVSGLFP
SAYWCGQALVDVPLFWALMCLMFIVVLLFNRICPMEAFIILPMVFSAIGYGVSLIFLVYL
IAFMFRKRRTNRYLWSFVFVLVNFTLHMFSNSYVFFYIFSTLVPPYPLLGWLIFSTRHLS
FISSSNLLRDKWSNILVAVFAPYIHSVLFGFLLCCLEIRYGEAVAERDPIFRIQWRRALP
PHNSDPPGQEPPEVQAERKRARSAAGSLQPEESVIVVNGLRKEYEDKKACSIFKKKKKVA
VKNLSFCVKKGEVLGLLGPNGAGKSTTIRMISGDVAVTAGEVLLQGCRAVVLGCCPQEDP
LWLDLTVLQHLEAYAAVRGVRGEDAAVLISRAAKALDLQKCLKTPARRLSAGEARKLCFA
LSILGSPTVMLWDEPSAGMDVAGQHCLWKAIQAAVRSKECAAVLSTHCLEEAAMCDRVAV
LVAGQLRYIGSPEEMRRKFGTSYILEVQPKDVGQSDALHSEIVHLFPGAARQKRISSLLI
YKIPKEDVLPLSQAFSKLEAAKQNFRLDEYSLSLHTLQQVFMDFNGDLEEPDLEAAAEEA
AEQRLLQP
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagtggcctcagactctgtgctgaagggtataacaatagaagaggccgtaaat
gagaaaaacctgtcagcaagaggaattttgaagtatgatgcaatcggtgttgtttttaag
gatgacttctcctaccatctcagatttcagagctaccgtgtgatatctcccgttgatgcc
tttgaacacattgatacctgctacaatgtgtcatcaccctactgcaagattccttcgtac
tggtatggaggattcctgtccattcagtccagcattgatgcagcagtcatagagatgaaa
acgaaccgttctgtctgggaagagatgaaatcaattagcggcatccgtctgcaatcaccc
ttgatcaaatccatatataaagtgaattacatttggttcaccatttacagcatgctgtgt
ttctccccttatgtgtactttctatcagtgaaagttatcagagagaaaaagaagctcaag
gtgttaatgaaagcaatgggtttacaggacatcgccttctggttgtcctggagcctgctg
tacaccatttacatcgccataacgtcgagtctgctggcagcaatcacggttggagaggtc
acccaagaccgcagcttttcagaaatatatttcctttattttttctacggcattgcgtct
attcacttctgtttcatgctcagctccttgttaaagcagcctcatattaccagttttgtg
ggatttttccttcacatcgtcttcggttcgctgggcttcatgacactgtttgaacaagtg
ccaccatctttggaatgggtctttaacctcttcagtccttacacctttacagctggcatc
tcaaagattgtaaaattagaaaaatatggaccaactgttgcaatggagttgtaccctttc
tttaaccaatacagcatgctgatcctggacagcatcctgtatttactgctggccatctac
tttgataaggttttgcctggcaaatatggggtgccatatccccccctgttcttcctcagg
ccgtcatattggctgcagcaggacagcaagtgcagcacccagcctgaccccatccctgtc
cctggctgtgacactgagcccatgcctgagggcttcgaggggaaggaggccatcagacta
tacaacattagaaaaatatatgagaggaagggcaagagaaccgaagctttaagaggtttg
tccttcagcatttatgaaggtcagatcactgcattgcttggtctcagtgggtctggtaaa
actgccctcttgaatgtgctcagtggattttccaagccttcagcaggttctgcagtgatt
tacaactacaaggtgtctgaagtacaggatatggaaggaattcaggcagtggttgggatt
tgcccacagttagatttacattttgaagccttaacagtgaaggaaaacttgagaattttt
gctcacgtcaaggggattcagtggaaagaagtagagcaagaggtgcagaaagtcctggta
cagttggacctcgccgaccttcaggatgtccacgctgactctctgagtgggggacaaaaa
agaaaactctctcttgcaattgcaattttaggggatccccaggtgctgctcttggacgag
ccaatggtggggctggatccctgctccaggcaccacgtgtgggagctgctggccgagcgc
cgggctggccgtgtgacactcatctgtacacagtctgtggaggaggctgatgcttgtgcc
gatcggaaagctttcctttcaaatgggagattacagtgcgttggctcatctctgtacttg
aagagaaaatggggaattggctatcacttaaggatgtgcataaatgatcagtgtgaccct
gggcttgcatcatccctggtcaggcggtacatccccaatgctgtgctcaaagggcgggac
agggatgagctgtgttacatgctgcctctggaaaataccaagagtttcccagatctgctt
ggccacctcgacaacggcctcttgctgggcgttgttcattacgaggtcagcaggacaacc
ctggcagatgctctcctgaagttggaaggcaaggaagatattgatcacaaagaaaacctg
aaggagagcgaccagaacttcctgggcttttctgaacctgcacacacagcagcaagtggc
atggagctctggaggcagcaggtcctcgccgtggccagagttcgtttctacagattgagg
cacgatggaaagcttctccggtccctattgctgttctttggagtatttatcatccagatg
ctcatgtttttctttggtttcaatctatggaacaaatccatctcagaactgacagccagc
aagtattttcttcccgctcagcctcccactcaaactcaaagcaaggcaacaaatcttctc
atcttcaatgacacaggatcagaaatagaggatttcattgctgctttgaagattcaaaat
ataatgccagaaataactctcgagaaaaacatcacaagcctgccacaacataatggagct
ataaagatatccctggaaggcaaggcagaaaacccagaagcaggccgtggtatttttttt
ctcagtgttgcttacatgctgatctgggctgctggtttgcctcctcactttgcagtgagc
agcgtggaggattacaagaaaaaggctcgtgcccagctgcgggtctcggggctctttccc
tcggcatactggtgtgggcaggcactggtggacgtcccactcttctgggccctgatgtgc
ctcatgttcatagtcgtgctgctcttcaaccgcatctgccccatggaggctttcatcatc
ctgcccatggtcttcagtgccattggttacggagtttctctcatcttcctcgtctatttg
atcgcctttatgtttcgcaagcgtcgaaccaatcgttacctgtggtcttttgtcttcgtt
ctggtgaacttcactctccatatgttcagtaacagctatgttttcttctacatcttctcc
actttggtgcccccatatccactcctgggctggttgattttctctacaagacacctatca
tttatttccagtagtaatcttcttcgtgataaatggagtaacatcttggttgctgtcttt
gcaccttacatccacagtgtgttgtttgggtttctgctgtgctgcttggagatacgatat
ggagaagcagttgcagaacgtgatcccatcttcaggatccaatggagaagagccctcccc
ccccacaacagtgacccaccagggcaggagccccccgaggtgcaggcagaacggaagcgg
gcacggagtgcagcaggctccctgcagcctgaggagtcagttatcgttgtcaatggtctg
cgcaaggagtatgaagacaagaaagcctgttccatctttaagaaaaagaagaaagttgcc
gtcaaaaatctttcattttgcgttaaaaaaggagaggtgttaggtctgttaggacctaat
ggagctgggaagagcacaactatacgcatgatttctggagacgtagcagtgactgctggg
gaggtgctgctgcagggctgcagggccgtggtgctgggttgctgcccacaggaggacccg
ctgtggctggacctcaccgtgctccagcatctggaggcctatgctgctgtgcgaggggtg
aggggagaggatgcagctgtgctcatcagccgtgcagccaaggccttggacctccagaag
tgtttaaaaaccccagcgaggaggctgtctgctggagaagccaggaagctgtgttttgca
ctgagcatcctggggagcccaacggtgatgctttgggatgagccatcggcaggcatggac
gtggcagggcagcactgcctgtggaaagccatccaggctgctgtgaggagcaaggagtgt
gcagctgtgctgagcacacactgcctggaggaggcggcgatgtgtgaccgcgtggccgtg
ctggtggcggggcagctgcggtacatcggttcccctgaggagatgagaaggaagtttggc
acgagttacatcctggaagtccaaccaaaggacgtggggcaaagcgatgctctccatagt
gaaattgtgcacctcttccctggcgcagctcggcaaaaaaggatttcttctttgctcatc
tacaagataccaaaggaagatgtactacctctatcccaggctttctccaagctagaagca
gctaaacagaatttcaggcttgacgagtacagcttgtctttgcacactttgcaacaggtg
ttcatggacttcaatggggacctggaggagcccgacctggaggcagcagctgaagaggct
gcagagcagaggttgctccagccctga
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