Tympanuchus pallidicinctus (lesser prairie-chicken): 128083014
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Entry
128083014 CDS
T08967
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128083014 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpai03019
]
128083014 (NUP85)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128083014 (NUP85)
Messenger RNA biogenesis [BR:
tpai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128083014 (NUP85)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128083014 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
128083014
NCBI-ProteinID:
XP_052543829
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MMSSGGSSTCEGLECVKRDPSLESDRGSAPGSAPPHSRCLPTAPLRDCSGPPRRGLSVPA
LFPGRAAAPAPKSRSLGGSEVVPGADPARTRLCFAWGPAEMLLCETLFGCRGRERREAPG
GSAGPGPAGCGAAGGGDGAAGPACVFVVRRDQDIYMETLRKLFNESHGIFVGLQRCEEER
AARARNAQLVQVSKNYRSVIRACMEDMHQAAISTRDSALHSQYSIQVSILSAMELIWNLC
EILFVEAAPAGPLLLRLLDWVQLHICDVDNMVREVLSSDNPSKHKLFWNVVDIFVLQGRM
DEARHLLSKEAIANPTSMNMYKILDDLMKKMPVPSLGNTQTLTEMELKWQHWHEECQRYL
QDGTFASNSHMESICKILLGDENAILEKKELMTTWYHFLVTRLLYSHPTVKPMELRFYAQ
SSMDMFLGEESSPEPLDIILMAAFEFELHQVIKECSVALSNWWFVAHLTDLLDHCKLLQS
HNLYFGSNMREFLLLEYASGLFSHHSLWQLGVDYFDHCPEYGRVYLELHIERIPLNTEQK
ALKVLRICEQRQMHEQVRSICKIMAMKALRNNRLGSALSWSIRAKDAAFATLISDRFLKD
YCERGCFSDLDLIDNLGPSMLLSDRLTFLGKYREFHRLYGEKRFSEAARLLLMLMTAHIA
PCSFWMTLLTDALPLLEQKEVIFSAEQTNELMRCLEDLTAGKLDRQKFQDDDVETMKVEM
LRLALARNLARVIVKEGTLEGSCRQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttctggaggctcatctacctgcgagggcctcgaatgcgtaaagagagaccca
tcgttagagagcgaccgcggctcggctccgggctcggctccgccccactcccgctgcctc
cccaccgccccgctccgggattgcagcggcccgccccgccggggcctttcggtgccggcg
ctgtttccggggcgagcggccgcgcctgccccaaagtcacggagcctcggcggttccgag
gtggtgccgggcgccgacccggcccggacgcggctgtgcttcgcgtggggccccgccgag
atgctgctgtgcgagacgctcttcggctgcagaggcagggagcgccgcgaggctccggga
ggcagcgcagggccggggccggcggggtgcggcgctgcgggcggtggggacggagcggcg
ggccccgcgtgtgtgttcgtggtccgcagggatcaggacatctacatggagacgctgcgg
aagctcttcaacgaatcccacggcatcttcgtcgggctgcagcgctgcgaggaggagcga
gccgcgagggcgaggaacgcgcaattagtccaagtgagcaaaaactaccgctcggtcata
agagcctgcatggaggacatgcaccaggctgcaatttcaacccgggactctgccctgcac
agccagtacagcattcaggtttctattctctctgctatggagctgatctggaatctgtgt
gagattctgtttgttgaagcagctccagccggtcctctcctgcttcgtctccttgactgg
gttcaacttcacatctgtgatgtagacaacatggtccgtgaagttctgagcagtgacaat
ccatcaaaacacaagctcttctggaacgtggtggatatctttgtgctgcaaggccgaatg
gatgaagcacgccacttgctctccaaggaagccattgcaaatcccacatcaatgaacatg
tacaaaatcctggatgatttgatgaagaagatgcccgtgcccagtcttggtaacacccaa
acgctgactgagatggagctgaaatggcagcactggcatgaagaatgccaacgttatcta
caggatggaacctttgcttccaattcccacatggaatccatctgcaagatcctgctggga
gatgagaatgccatactagaaaaaaaggaactcatgactacttggtaccactttctggtt
actcgactcctgtattcgcatccaactgtgaagccaatggaactgcggttctatgcacag
tctagtatggacatgttcctgggtgaagaaagcagccctgaacctctagacataatttta
atggcagcctttgaatttgagcttcaccaagtgatcaaggagtgcagcgttgctctgagc
aactggtggtttgtggctcatctgactgaccttctggatcactgtaaactcctgcaatct
cacaatctctattttggttcaaacatgcgtgaatttcttttactcgagtatgcctcagga
ctcttctcccatcacagtctgtggcagctgggggtggattactttgaccactgtccagaa
tatggcagggtctatttggaacttcatattgagcggatacctcttaacacagaacagaag
gccctcaaagtgctgagaatctgcgagcagagacagatgcacgaacaagtccgaagcatc
tgtaaaatcatggccatgaaggctctgcgaaataatcgcctgggctctgccctgtcttgg
agcatcagagccaaggatgcagcttttgctacgctaatatcagatcgattccttaaggac
tactgcgaaaggggatgcttttctgacttagacctcatagataatttgggaccatccatg
ctgctcagtgaccggctgacatttctcggcaagtaccgtgaattccaccgtctgtatggg
gagaagcggttctctgaagctgccaggctgcttttgatgctgatgactgctcacattgcc
ccttgctccttctggatgaccctcctgacagatgcccttcccctgctggagcagaaagag
gtcatattttcagcagagcagactaacgaattaatgcgatgcctggaagatctaacagca
gggaagctggataggcagaagtttcaggatgatgatgttgagaccatgaaagtggaaatg
ctgagacttgctcttgcgcgaaatcttgcacgagtcattgtcaaagaaggcacattagaa
ggatcttgtagacagtaa
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