Tympanuchus pallidicinctus (lesser prairie-chicken): 128083216
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Entry
128083216 CDS
T08967
Symbol
RECQL5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128083216 (RECQL5)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128083216 (RECQL5)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128083216 (RECQL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ5
SRI
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
128083216
NCBI-ProteinID:
XP_052544202
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MSSTAAPGLQGRVRKTLGKVFGFESFKTSLQESATMAVVRGEKDVFVCMPTGAGKSLCYQ
LPAVLAVGITIVISPLIALIQDQVDHLLALKIKACSLNSKLSAQEKKTILADLASEKPQI
KLLYITPEMAAASSFQPTLNSLVSRNLLSYLVIDEAHCVSQWGHDFRPDYLRLGTLRSRI
PNTPCVALTATATKQVQEDIVTALKLKQPLATFKTPCFRSNLFYDVQFKELLTDPYANLK
DFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVKAKAYHAGLKAADRTSVQ
NEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSCCRLY
YSRNDRDQVSFLIKKELSKIQEKKGTLKESDKAVMTAFDAIVSFCEELGCRHAAIAKYFG
DVTPPCNKCCDYCKNPEAVKRQLEALERCSNNWSKTCIGPTGSSWDCYDPELYEGGRRGC
RGFSSYDEESSGNGDEASEESRKREWDNFYKKQMSLRRGKEPEKEDFVPPSADCPLKDAF
SRRISKLTVKGREHCLKILEEALSANQEIPTAVGKWSDPHACAVELEYEAFRTSKMANSY
KASVLKKVAEINKASKGGELFSVFGSGTGGSSSSGTKSESPAEEDFLPASQVYSFKPKRV
GAGFPKKSGLFQTASELLKIQEDSDTKLVKKEDCPKKQDNSNCSLELDTKSTVFQKKKRA
TKAVCESAEVVVVLPEKKEQQTSPDTKAVLEDSSVKRTKPSKKQQMLAEAAKKESQDISK
FFSLSKGGSKAKSCSSTEDVSCTASTLPQVSSQSICQEKSITQENKDTPGGDVTGQSQGE
NEELGETEGTLTEREEGCKTQQAAECKLLQEELDASSVAESVTETEQAVVGEGQSGKRQG
SDEDTESPATKRMRTAAKSSILSQPESKSVGLTKKKVTFDPNLLQSDKEGASKTIQPVAK
SMSLKETADIVVKYLTPFYKGGKFASKDLFKGFARHLSHLLTEDQNPARKTGGAASLAVK
EEAQRLIKEFFKTRVRCESETDWQELHCLEG
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacggcagctccaggcctgcagggcagggtccggaaaacgctggggaaggtc
ttcgggtttgaatcgttcaagacttccctgcaggaaagtgcaaccatggctgtggtgaga
ggcgagaaggatgtctttgtatgtatgcccacaggggcagggaaatccttgtgctaccag
cttcctgcagttctggcagtgggcatcaccattgtcatttcacctctgattgcactgatt
caggaccaagtggaccatttgctggctctgaagatcaaagcctgctccctgaactccaag
ctttccgcccaggaaaagaagaccatcctggctgacttagcaagcgagaagcctcagata
aagcttctgtacatcaccccagagatggcagctgcctcatccttccagcctacactcaac
tccctcgtgtctcgaaatctcctgtcctacctggtaattgatgaagctcactgtgtctcc
cagtggggacacgatttccgaccggattacctgcggctgggcaccttgcgatctcgcatc
cccaatacaccatgtgttgctttgactgccactgctaccaagcaagtccaggaggatatt
gtgacagcactcaagctaaagcagccacttgccacctttaagactccttgcttcagatct
aacttgttctacgatgtgcaattcaaagagctcttgactgatccttatgccaacttgaag
gatttctgtctgaaggcactggaagtgaagaacaccactggggtgtactctggctgtggc
attgtgtactgcaggatgagggatgtgtgtgaccagctggctattgaattgagctaccga
ggagtgaaagccaaagcgtatcatgcagggctcaaggcagctgacaggacttcagttcag
aatgaatggatggaggagaagatcccagttattgttgcaaccatcagttttggaatggga
gtagacaaagcaaatgtcaggtttgttgctcattggaacattgccaagtcaatggcaggg
tattaccaagagtctggcagagctgggagagatgggaagccctcctgctgccgcctctat
tactccaggaacgaccgggatcaagtaagcttcctgatcaagaaggagctctctaaaatc
caggaaaaaaaaggcaccttaaaagaatctgacaaggctgtgatgacagcctttgatgct
attgtaagcttctgtgaggagctggggtgtcgtcacgctgccatcgcaaagtactttggc
gatgtcactccaccttgcaataagtgctgtgattactgcaagaacccagaggcagtgaaa
aggcagctggaggcactggagcgctgcagcaacaactggagcaaaacttgcattgggccc
acaggatcctcgtgggactgctatgacccagagctgtacgaagggggaaggagaggctgc
agaggttttagcagctatgatgaagaaagcagtgggaatggggatgaagccagtgaagag
agtcggaaacgggagtgggacaatttctacaagaaacagatgagcctgcgcagaggcaaa
gaaccagaaaaagaagattttgttcccccaagtgcagactgccccttgaaggatgccttc
agcagaagaatctctaagctgacagtaaagggacgggaacactgcttgaagatactggaa
gaagctttgagtgccaaccaagagattccaacagcagtaggaaaatggtcagaccctcat
gcctgtgcggtggagctggagtatgaagctttcagaaccagtaaaatggctaactcgtac
aaggcatctgtgctaaagaaggtagcagagatcaacaaagcatcaaaaggaggagagttg
ttctcagtctttgggtcaggaactggaggcagcagcagctcgggaacaaaatctgagtct
ccagcagaggaagatttcctccctgcatcccaagtttactcgttcaaacccaagcgtgtg
ggagctggctttccaaagaagtccggtttgttccagacagcttcagaactgctgaagatc
caggaagatagtgatacaaaacttgtcaaaaaagaagattgtccaaagaaacaagacaac
agcaactgcagtctggaactggacacaaaatccactgttttccagaaaaaaaagcgagca
accaaagcagtgtgtgagagtgctgaggtagtagttgttcttcctgagaagaaggaacag
caaaccagtccagacacaaaagctgtccttgaggatagctctgttaagaggaccaaaccc
agcaaaaagcagcaaatgctggcagaagcggccaaaaaagaatcacaggatatttccaag
ttcttctccctttccaaaggtgggtctaaagccaaaagttgcagctcaacagaggatgtc
agctgtactgcaagcacactacctcaggtttcttctcaaagcatatgtcaagagaaatct
ataactcaggaaaacaaagacacccctggaggagatgtgacaggacagtcccagggggag
aatgaggagctgggagagacagaaggaacactgactgagagggaggagggctgtaagacc
cagcaggctgctgaatgtaaactccttcaggaagaacttgatgcatcgagtgttgctgaa
agtgtcacagaaactgaacaagctgttgttggggaagggcagagtgggaagcgacaagga
tcagatgaggatacagaaagtcctgcaacaaagcggatgcgaacagcagcaaaatcttct
attctgtcccagccagaaagcaaaagtgtgggtctgacaaagaagaaggtgacttttgat
ccaaacttattgcagagtgataaagaaggagccagcaagaccatacaacctgtggccaaa
agcatgtccctcaaagagacagcagacatcgttgttaaatatttgaccccattctacaag
ggtggcaaatttgcttccaaggacctgtttaagggctttgctcggcacctgtctcactta
ctgactgaagatcagaaccctgctcgcaagactgggggtgctgcttctcttgcagtgaag
gaagaagcacagagactcattaaggagtttttcaaaacgcgagtcagatgtgagagtgaa
acagactggcaggagctgcactgcttggagggatga
DBGET
integrated database retrieval system
