Tympanuchus pallidicinctus (lesser prairie-chicken): 128083326
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Entry
128083326 CDS
T08967
Symbol
SMYD4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
128083326 (SMYD4)
Domain-containing proteins not elsewhere classified [BR:
tpai04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
128083326 (SMYD4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
SET
TPR_12
TPR_1
zf-MYND
ANAPC3
TPR_19
TPR_10
TPR_NPHP3
TPR_7
TPR_MalT
TPR_14
TPR_4
Motif
Other DBs
NCBI-GeneID:
128083326
NCBI-ProteinID:
XP_052544375
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MALPVEEWRQNVARRWAALEPALRERLAAAPLGEALRVGCGLFGPEVAALRRLCGRVRTD
KEPAAARFYREEGNRRFGRCRYSEAARLYSQAAAHEPPRSPEVALCFANRSAALFHLGHF
EVCLEDIARAESHGYPDRLLPKVLLRKAECLLRLGRLQDATDTLTAVENKMTVDGIMTSS
THLTLLKKLNQLKTEIHQGSCSEPSRGAHGDIQRESEIWEENGSISGASSSLSLNFNTER
GRHLVASQDILPGQNLLKEKAFVCVLCPVEGDSLLLQNSSETVWDTQVTNADLYCHRCLK
QLLASVPCCGCSYAKYCSQNCADVAWEQYHRTECPLGALLLVLGVFCHVALRTVLLAGFS
EVSRLVEWSHDDSNKDHCNAEAGGKHPSEALDTRAGTKGIPGCNDNGQYQSSYRAVFNLL
PHVEKHSPEHKFLCMLSIVAVCKKLQETGLEATVLNGQSSTMGSEQKMYGKTSEELSPEL
MIVAEAMLRHVLQLQCNAQAVTVMQELESGDGAVVNKKPVRLATAFFPVLSLLNHSCSPN
ISVSFSGTVATVRASQPIPSGQEIFHCYGPHHCRMRVAERQQLLSQYFFECRCQACLDEL
ESDVESVSMRNSFCCPNCQASMQGEEMLCCSNEACAFSVSRGRLSRRLLDLQQQMEKALE
LLRDSKADEAIRMLLKCQMDARNFLSPEHLLMGELEDHLAQIYAALGKWQEAARHLERSI
QLVEMHHGPSSVEMGHELFKLAQILFNGLAVSEALSTIQRAEEILSVHCGPQSTQIQELQ
EMKTCLLELPRSILQRT
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccggtggaggagtggcggcagaacgttgcccggcgctgggccgctctggag
ccagctctgagggaacggttggcggcggcaccgctgggcgaggcgctacgggtgggctgc
ggcctctttgggcccgaggtggcggccttacggcggctgtgtggccgggttcgcacggac
aaggagccggcggccgctcgcttctatcgggaggagggaaatcggcggttcggccgctgc
cgctacagcgaagccgctaggctgtactcgcaggccgcggcccacgaacctccccgcagt
cctgaggtggccctgtgcttcgccaaccgctccgcagccctgttccatctcgggcacttt
gaggtttgtttggaagatattgccagggctgaaagtcatggctatccagacaggctgctg
cccaaggtcttgctgcggaaggctgaatgcctgctgcgtttggggaggttacaggatgca
acagacaccctcactgcagtggaaaataaaatgactgtagatgggattatgactagttct
actcaccttacgctactgaaaaagttaaatcagctgaagactgaaatacatcaggggagc
tgttcagaaccttcacgaggagcacatggtgatattcaaagggagtcagagatctgggaa
gagaatggcagtatttcaggtgcatcttcatctttgagcctgaatttcaatacagagaga
ggacgtcacttggtggcctcccaggacatcctgccaggacagaacctgttgaaagagaag
gcttttgtctgtgtgctctgcccagttgaaggggatagccttcttctacagaacagcagt
gaaacagtgtgggatactcaagtcactaacgcagatctttattgccaccgttgtctgaag
cagctcttagcctctgtcccgtgctgtggatgcagttatgcaaagtactgcagccaaaac
tgtgcagatgtggcatgggagcagtaccacaggacagagtgccccttgggagcactgctg
ctcgtgttaggggtcttctgccatgttgccttaaggactgttctactagcaggattttca
gaggttagcaggctggtggagtggtcgcatgatgatagcaacaaggaccattgcaatgct
gaggctggaggtaaacatcccagtgaggcactggatacaagagctggaacaaaaggtatc
cctggttgtaatgataatggccagtaccagagttcttaccgagctgtgttcaaccttttg
ccacatgttgagaagcatagtcctgaacataagttcctttgcatgctgagtatagtagct
gtatgcaaaaaattgcaagaaactggtctagaggctactgttctgaacgggcagtcatct
acaatgggatcagaacagaagatgtatggaaaaacatctgaggaactgtctccagaactg
atgattgtagcagaagcaatgctgaggcacgtgttgcagctacagtgtaacgcacaagcg
gtcactgtaatgcaggagttagagtctggagatggtgctgttgtaaataagaagcctgtg
cgcctggctacagccttctttcctgtcctcagccttctgaaccattcgtgcagccccaat
atcagtgtgtcattcagtgggacagttgccactgtcagggcatctcagccaatcccaagc
ggccaggagattttccattgctatgggcctcatcactgtagaatgagggttgctgagaga
caacagcttctcagtcagtatttctttgagtgccgctgtcaggcatgcctcgatgagtta
gagtctgatgtcgagagtgtgtccatgagaaactcattctgctgccctaactgccaggct
tcaatgcagggggaagaaatgctttgttgttcaaacgaagcttgtgcattctcagtcagc
agagggagattgtcacggcgcttactggaccttcagcagcaaatggagaaagcattagag
ctgctaagagacagcaaggctgatgaagctatcagaatgctcctgaagtgtcaaatggat
gctagaaacttcttgtcaccagagcatttgctgatgggagagctggaggaccatctggca
cagatctatgctgctcttggaaagtggcaggaagcagccagacacttggagaggagcatt
cagcttgtggaaatgcatcatgggccatctagtgtagaaatgggtcatgaacttttcaaa
ctggcacaaattctcttcaatggattggcagtttctgaagctctgagcacaattcaaaga
gcagaggagattttatcagtgcactgtggtccgcagagtactcagatccaggaactacaa
gagatgaagacctgtctgttagagcttcccagaagcatccttcagaggacttaa
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