Tympanuchus pallidicinctus (lesser prairie-chicken): 128083376
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Entry
128083376 CDS
T08967
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128083376 (VPS53)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Others
EARP complex
128083376 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
128083376 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Laminin_II
Sec8_N
GrpE
Syndetin_C
NBD94
hAT-like_RNase-H
MCPsignal
COG3_N
FUSC
COG5_N
Snf7
Cauli_AT
Tropomyosin
XhlA
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
128083376
NCBI-ProteinID:
XP_052544491
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MEEDELELAAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRKLDDSIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWCMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVKKPEAPPPSTNPFLEDETGAETDEIVIEKSDTDKPKKPKVPDNPFHGIV
SKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLELFRQRLPAPPSGVENSSSLSLSTPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgagttggagctggcggccgggctggaggcggcgctggagttggctcct
gccgtgcaggccgccatcgagcaggtatttcccagccaagaccccctggacagagcagat
ttcaatgctgtggagtatattaacactctctttcccactgagcaatctttggcaaacatc
gatgaagttgtcaacaaaatcagattgaaaataaggaagttggatgacagcattcgaact
gtagtgagaggacagaccaacgtgggtcaggatggcaggcaggccctggaagaagcccag
aaagccattcagcaactctttggtaaaattaaggatattaaagacaaggctgaaaaatca
gaacaaatggttaaagaaatcacacgggacatcaagcagctggatcatgccaagcgccat
ctgaccacctccatcaccaccctcaaccacctgcacatgctggcagggggagtggactca
ctggaggctatgaccagaaggagacaatatggggaagttgccaaccttctacaaggcgtt
gtgaatgtgttggagcacttcaacaaatacatggggattcctcagattcgacagctttct
gaaagggtgaaggcagcacagaatgaattaggacagcagatcctggctgactttgaggaa
gcctttccttcccaaggtacaaagagacctggtggacccagcaatgtcctgcgtgatgcg
tgtctcgtcgccaatgtcctggatcccagaatcaagcaggaaatcatcaagaaatttatt
aaacaacacctctcagagtatctggtccttttccaggaaaatcaagatgtcgcctggctg
gataagatcgacaggcgctacgcgtggatcaaacgtcagctggtggactatgaggagaag
tacgggcgcatgttcccccaggagtggtgcatgacggagcgcatcgctgtggagttctgc
cacgtcaccaggacagagcttgccaagataatgcgtacaagagcaaaggaaattgaagtg
aaattgcttctgtttgcaatccagaggacaaccaactttgaaggacttctggcaaagcgc
ttctcaggctgcactctggctgatggcacagtgaagaagccagaagcacctcctccttcc
accaacccatttctagaggatgaaactggggcagagacggatgagattgtaattgaaaaa
agtgatacagacaaaccaaagaagccgaaagtcccggacaatcctttccatggcattgtt
tccaagtgcttcgagcctcacctttatgtgtatatcgagtcccaagacaagaatctcagc
gagctgatcgacaggtttgtggctgacttcaaggcccaagggcctcccaagcccaacgtg
gatgaaggaggagccgtcctgcccagctgtgctgacctctttgtgtactataagaagtgc
atggtgcagtgctcccagctcagcacaggtgaacccatgatagccctgaccaccatcttc
cagaagtaccttcgggagtacgcctggaaaatcctgtctggcaacctgcccaagacaacg
agcagcagtggcgggctcaccatcactagtttgctgaaagaaaaggaaggctctgaagta
gccaagtttactttagaagagctctgcctcatttgcagtatccttagtactgcagagtac
tgcttggcaacgactcagcagttggaagagaaactcaaagaaaaagtggatgcaagtctg
gtggagagaatcaacctaacaggagagacggacaccttcagcattgtgatttccaacagc
atacagctgctagtgcaggacttggacgcagcctgtgaccctgccctgactgctatgagc
aagatgcagtggcagaacgtggaacatgttggtgaccagagtccttatgtcacctcagtg
attctccacatcaagcagaacgtccccatcatccgtgacaacctggcatccaccaggaag
tatttcactcagttctgtataaagtttgcaaactctttcattcccaagttcatcaaccac
ctctttaagtgcaagcctatcagcatggtgggagcagaacagctgctgctggacactcac
tctctgaagatggtcctcctggatctgccctccatcgggtcccaagtggtgagaaaggct
cctgccagctacacgaggatagtggtgaaaggcatgacgcgggctgaaatgatcctgaag
gtggttatggccccgcatgagcccccagttgtgtttgttgacaactacatcaagcttctt
gctgactgcagcacggacactttccagaagatactggacatgaagggcctgaagaggagt
gagcagagcagcatgctggagcttttccgccagcgcctcccagcacctccttctggggtg
gagaacagcagctcactctcactgagcaccccaacccctgagcaggaatcctcccggata
cggaaactggagaaactcatcaaaaaaagactctga
DBGET
integrated database retrieval system
