Tympanuchus pallidicinctus (lesser prairie-chicken): 128083397
Help
Entry
128083397 CDS
T08967
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128083397 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128083397 (SLC6A4)
Transporters [BR:
tpai02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128083397 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF6366
Motif
Other DBs
NCBI-GeneID:
128083397
NCBI-ProteinID:
XP_052544534
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MEKKATSNETQLLTSKKGTSDCNEGEDCKENGLLIKNPKSALRLMEDGNKIHPGQGNKEE
AAQISNGYSGVQSSVPCNGVGEVEDAQCTNPAATATTATTCGAEGQQQLMELEDRETWSK
KIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQYHR
NGCISIWRKICPIFKGIGFAICVIDLYVASYYNTIMAWVFYYLVSSFTTELPWTSCNNAW
NTGNCTTYFSKDNISWALHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLIFI
IVYFSIWKGVKTSGKVVWVTATFPYVILFILLVRGATLPGAWRGVLYYLKPEWQKLLATE
VWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTVLG
YMAEMRNEDVSEVAKDMGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAGLE
GVITGVLDEFPHVWSKRREFFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPAVLTV
VFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNPPELR
LFDYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIITPGTFKERILKSITPETATEIPFGD
IGMNAV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaacgagactcagctgctgacttccaagaaaggtacctca
gactgtaacgaaggagaagattgtaaagagaacggactgctgatcaagaaccctaaatct
gccctacggctcatggaggatgggaataaaatccatcccgggcagggaaataaggaggag
gcagctcagatctcaaatggctattcgggagttcagagctccgtgccttgcaatggggtg
ggagaggtggaggatgcgcagtgcaccaacccagcagccacagccaccacagccaccacg
tgtggagcagagggccagcagcagctgatggagctggaagacagagagacctggagtaaa
aaaattgactttctgctctctgtcattggatacgcggtggatctgggaaacgtgtggaga
tttccttacatatgctatcagaatggaggaggagcattcctcattccttacacaattatg
gccatcttcggtggtattccgctcttctatatggaattagcactaggacagtaccacagg
aatggctgtatttcaatttggagaaaaatatgtcctatattcaaaggcattggctttgcc
atctgtgtcatagacctctatgtagcctcctattacaacaccatcatggcgtgggtcttc
tactacctcgtgtcctccttcacgacagagctgccgtggaccagctgcaataatgcatgg
aacacaggcaactgcactacctacttcagcaaggacaacatcagctgggccctgcactcc
atctctcctgcagaagaattttatacccgccaagttctacaggtgcacaggtccaatggg
ctggatgacctggggggcattagctggcaattgaccctctgtttattgttaatcttcatc
attgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtggtgtgggtcaca
gccacgttcccctacgtcatactttttatcctgctagtgagaggggcgactctgcccggt
gcctggagaggtgtcctctactacctgaaacctgaatggcagaagctcctggccactgag
gtttgggtggatgcagcagctcagatttttttctccctcggcccaggttttggggtcctg
ttggcttatgccagctacaacaaattccataacaactgctaccaagatgccctggttacc
agcactgtgaactgcctgaccagcttcgtgtccgggtttgtcattttcactgtgctgggg
tacatggctgagatgaggaatgaagatgtgtcggaggttgccaaagacatgggacccagt
ctgctcttcattacctacgctgaagccattgcaaacatgcctgcctcaactttctttgcc
atcatatttttcttgatgttactcacgctgggattagacagcacgtttgcaggattagag
ggagtgattacaggagtactggatgaattcccacatgtctggagcaagcgcagggaattc
tttgtcctcggactgatcatcatttgctttttggggtcgttggcaaccctgacctttgga
ggcgcctatgtggtgaagctgtttgaggaatacgccacaggcccagctgtgctaacagtg
gtgttcctggaagcggtggcagtggcctggttctacggcattacccagttttgcaatgac
gtgaaagaaatgctgggcttcacccctggctggtactggcgagtgtgctgggtggcaatc
agtcccatcttcctgttgttcgtcacttgcagctttctgtccaaccctcctgagctacgg
cttttcgattacaactatccctactggaccacagtagtgggctactgcataggaacctct
tccatcatctgcatcccaatctacatggtttatcggttgatcatcactcctggaacattt
aaggagcgtattctgaaaagcattactccagaaacagccacagaaattccttttggagac
atcggcatgaacgcagtgtaa
DBGET
integrated database retrieval system
