Tympanuchus pallidicinctus (lesser prairie-chicken): 128083432
Help
Entry
128083432 CDS
T08967
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04142
Lysosome
tpai04144
Endocytosis
tpai05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128083432 (CLTC)
04142 Lysosome
128083432 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128083432 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128083432 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpai04147
]
128083432 (CLTC)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128083432 (CLTC)
Exosome [BR:
tpai04147
]
Exosomal proteins
Proteins found in most exosomes
128083432 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
128083432
NCBI-ProteinID:
XP_052544621
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKKECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatactgccgatccgcttccaggagcacctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacgatggagtcggacaaattcatctgcata
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaattcgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctggaaaaacgcttcaaatatttaacattgaaatgaagagcaaaatgaag
gctcacacaatgacagatgacgtcaccttctggaagtggatctccctgaatactgttgcc
cttgtaacggataatgcagtctaccattggagtatggagggagagtcccagcctgtgaaa
atgtttgatcgccactctagtcttgctggctgccagatcatcaactaccgtactgatgcg
aagcagaaatggctcctgctaacgggcatatctgcacagcaaaaccgtgttgtgggagca
atgcagctctattccgtagacagaaaagtttcacagccgatcgaggggcatgcagctagc
tttgcacagttcaagatggaaggaaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagttgcacatcatcgaggttggcacaccaccaactgggaat
cagccgttcccaaagaaagcagtggatgtcttctttcctcctgaagcacagaatgacttt
cctgttgcaatgcagatcagtgacaagcatgatgtggtgtttctgataacaaagtatggc
tatattcacttgtatgacctggaaactggcacctgtatttacatgaacagaatcagtgga
gagaccatatttgttactgcacagcatgaagcaacagctggaattataggagtaaacagg
aagggacaagtgttatcagtctgtgtggaagaagagaatattattccctacattacaaac
gtgctgcagaatcctgacctagctttacgaatggctgtccgcaacaacctggccggagct
gaggaactttttgccagaaaattcaatgcattgtttgcacaagggaactattcggaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgt
ttccagagtgttccagcacaaccaggacagacttcccctttactccagtattttggtatt
ctgcttgaccaagggcaactgaataagtatgagtctctggaactttgcagaccggtgctt
cagcagggacgcaagcaacttctggaaaaatggttgaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtagaccctacactagcacttagtgtctatctg
agagccaatgttccaaacaaagtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttgggtatactccagactggattttcttgctgaggaac
gtaatgagaatcagccctgatcaaggacagcagtttgcccaaatgcttgttcaagatgaa
gagcctcttgcagacataacacaaattgtggatgtttttatggaatataacttaattcag
caatgtacagccttcttactggatgcactgaagaataatcgcccctcagagggtcccctg
caaacacgtttacttgagatgaacctcatgcatgcaccccaggttgcagatgctatcctg
ggaaaccaaatgtttactcattatgatcgggctcacatagctcagctgtgtgagaaagct
ggcttgctgcagagagcgctcgaacacttcacagacttgtatgacatcaagcgtgcagta
gttcacactcatcttctcaatcctgagtggctagtgaactactttggctccttgtcagta
gaagattctctggagtgtctgcgtgctatgttgtctgccaacatccgccagaacctgcag
atctgtgtgcaggtagcttcaaaataccacgaacagctgtcaacacagtcacttattgag
ctgtttgagtctttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
tttagccaggatccagatgtgcacttcaaatatattcaagctgcatgcaagacaggacag
attaaagaagtagaaagaatctgcagggaaagcaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctaccgctcatcattgtgtgtgatcgc
ttcgactttgtccacgacttggtgctgtacttatatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgcctgcctgttgttattggaggactgctt
gatgtggattgctctgaagatgtgataaagaaccttatccttgtagtgagaggccagttt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaaactacttctgccc
tggctggaggcaagaattcatgagggttgtgaggagcctgcaacacacaatgcattggcc
aaaatatacattgatagcaacaacaacccagaaagatttttgcgtgagaatccttactat
gatagccgagttgttggcaagtactgtgagaagagggacccgcacctggcctgcgtggct
tatgagcgtggacagtgtgatttggagctgatcaatgtgtgcaatgagaactctctcttc
aaaagcctttcccgctacttagttcgccgtaaagaccctgagctgtgggccagtgtgctg
ctggaaagcaacccgtacagaagaccactaattgaccaggttgtacagactgcactgtca
gagacccaggatcctgaggaggtgtctgttactgtgaaggccttcatgactgcagatctt
cccaatgagcttattgaactgttggagaaaatagttcttgataactccgtattcagtgag
cacaggaacctgcagaacctgctgattctcacagctattaaggctgatcgcacccgtgtc
atggaatacatcaaccgcctggataactatgatgctccagacatagccaatatagctatc
agcaatgagctgtttgaggaggcgtttgccatcttcaggaagtttgatgtgaacacatca
gctgtacaggtattaatagagcacattggaaacctggatcgtgcatatgaatttgctgag
cgctgcaatgagcctgctgtgtggagtcagctggctaaagcacagcttcagaaagggatg
gtaaaggaagcaattgattcatacattaaagcagatgatccttcctcgtacatggaagtt
gttcaagctgccaatgccagtggaaactgggaagaactggtgaaatatcttcagatggca
cgcaagaaggcccgggaatcatatgttgaaacagaattaatctttgctcttgctaaaaca
aaccgtctggcagagctagaagaatttatcaatggacccaacaatgcacatatccagcaa
gttggtgatcgctgttatgatgaaaagatgtatgaagctgctaagctgttgtataacaac
gtgtccaactttggccgtttagcctcaactttagttcacctaggtgaataccaggcagct
gtggatggtgctcggaaagcaaacagcactcgcacgtggaaagaggtctgctttgcttgt
gttgatggaaaagaattccgcctggcccagatgtgtggacttcatattgtagtgcatgca
gatgagttggaagagcttatcaattattaccaggatcgtggctactttgaagagctgata
actatgttggaagcagcacttggacttgagcgagcacacatggggatgtttacagagtta
gcaattctttactccaagttcaaaccacagaagatgagggagcacttggaactgttctgg
tccagagtcaacatccccaaggttctgagagctgcagaacaagcccatctctgggctgaa
ttggtgttcttgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggacaattcaaagatatcataactaaggtggccaat
gtggagctgtactacaaagcagttcaattctacttggaattcaaacctctgttgctcaat
gatctgctgatggtgttgtcccctcgacttgaccatactcgtgctgttaccttcttcaca
aaggttaaacagttacccctggttaaaccttacttgcgctctgttcaaaatcacaacaac
aaatcagtgaatgagtccctgaacaacctcttcattattgaagaagactaccaggccctt
aggacttccatagatgcttatgacaactttgacaacatttctcttgctcaacgtttggag
aaacacgagctgatagagttccgaaggattgctgcctatctgttcaaaggaaacaatcgc
tggaagcagagtgtggaactctgtaagaaggacagactgtacaaggatgcaatgcaatat
gcttcagaatccaaagatactgagttggcagaagaattgttgcagtggttcttgcaggag
aacaagaaagaatgctttggtgcttgtctctttacctgctatgatcttttaaggcctgac
gttgtcttggaaacagcgtggaggcacaacatcatggactttgccatgccatactttatt
caggtcatgaaggagtacttgaccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcatcggagtccttgagaaaggaagaggagcaagctactgaaacacaacctattgtt
tatggccagccacaactcatgttgacagcaggacccagcgttgcagttcctccacaagca
ccttttggctatggttacactgcaccaccctacgggcaaccgcagccaggctttgggtac
agcatgtaa
DBGET
integrated database retrieval system
