Tympanuchus pallidicinctus (lesser prairie-chicken): 128083459
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Entry
128083459 CDS
T08967
Symbol
MMP28
Name
(RefSeq) matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128083459 (MMP28)
Peptidases and inhibitors [BR:
tpai01002
]
Metallo peptidases
Family M10
128083459 (MMP28)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
DUF4953
Reprolysin_4
Reprolysin_5
Peptidase_M57
Reprolysin_3
Peptidase_M54
Metallopep
Reprolysin_2
Peptidase_M66
Astacin
Motif
Other DBs
NCBI-GeneID:
128083459
NCBI-ProteinID:
XP_052544686
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MGLRAALGLLLLLAAVRGAAVRGERRRAELFLQKYGYLGAPQPGQLSPVEFTAALRDFQR
VSHLPPSGVLDVPTLRQMGRPRCGTGDGESRPTAPRRRRSMQHGSKWHKRHLTYRVVNWP
PYLPQHEVRLAVRAAFELWSNVSSLVFWEARDGPADIRLTFFHGDHNDGINNAFDGPGGA
LAHAFFPRRGEAHFDSAERWSLHSGKGRNLFVVVAHEVGHTLGLEHSPTKSALMSPYYKK
LGKDFVLNWDDILAIQNLYGKPSRGLAIQLPGRVFTHFQDWSGDLYGEEHQRRSLSTYYC
SSFFDAITADTEHNLYIFKGSHFWVVSASGNTSQPQPLHMRWPGLPAGIDACAYSPFSHS
FYFFKGGRCWKYRGSTLVSGFPQKCSAHGLPRHPDTALYFQQLRRLVLFKGAKYFVLSEE
TLAPEPYYPRSLRDWDGVPPGTAGAVVHRDGFLYFFRDDRYWRFNQAKLQVVANGKWAAE
LPWMGCWDANGGHILF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggcggcgctcggactgctgctgctgttggcggccgtgcggggcgcggcg
gtgcggggcgagcggcggcgggcggagctgttcctgcagaaatatggctacttgggagcg
ccgcagccaggccagctcagccctgtggagttcacagcagcactgagggatttccagcgt
gtgagccacctccctcccagcggggtgctggacgtccccacgctgcggcagatgggccgt
cctcgctgcgggacgggcgatggggagagccgccccacggccccgcgccgcaggcgctcc
atgcagcacggcagcaagtggcacaagaggcacctgacgtaccgcgtggtgaactggccc
ccgtacctgccgcagcacgaggtgcgcctggctgtcagggctgcctttgagctctggagc
aacgtctcctcgctggtgttttgggaagcacgggatggcccggctgacatccgtctgacc
ttcttccacggggaccacaacgatgggatcaacaatgccttcgatgggccagggggggcc
ctggcccacgccttcttcccccgacgtggagaagcccacttcgacagcgccgagcgctgg
tccctgcacagtggcaaaggccgcaacctctttgtggtcgttgcacacgaggtggggcac
acactggggctggagcactcgcccaccaagagtgccctcatgtcaccctactacaagaag
ctcggcaaggactttgttctcaactgggatgacatcttggccatccagaacttgtatgga
aagccctccaggggcttggccatccagctgccaggaagggtcttcactcacttccaggac
tggagtggggacctgtatggtgaggaacatcaacggcggagcctcagcacctactactgc
agctccttcttcgatgccataactgctgacacagaacacaacctgtatatcttcaagggc
agccacttctgggtggtgtcagccagtggcaacaccagccagcctcaacccttgcacatg
cgctggccagggctgcctgccggtatcgatgcctgtgcctactccccattcagccacagc
ttctacttcttcaaaggtggtcgatgctggaaataccgtggctccaccttggtgtctggc
ttcccccagaagtgcagtgcccacggcctgccccgccaccccgacacagccctctacttc
caacagctccggcgcctggtgctcttcaaaggagccaaatacttcgtgctgagcgaggag
accctcgccccggagccctactacccccgcagcctgcgagactgggacggcgttccccct
ggcacagcaggggccgtggtgcaccgcgatggcttcctctacttctttcgggatgaccgc
tactggcggttcaaccaagccaagctgcaggtggtggccaatggcaagtgggctgccgag
ctgccgtggatgggctgctgggatgccaatggtgggcacatcctcttctga
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