Tympanuchus pallidicinctus (lesser prairie-chicken): 128083471
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Entry
128083471 CDS
T08967
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128083471 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128083471 (RNF43)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128083471 (RNF43)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128083471 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
zf-ANAPC11
DUF5305
zf-C3HC4_3
TMIE
DUF4381
Motif
Other DBs
NCBI-GeneID:
128083471
NCBI-ProteinID:
XP_052544705
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSGGPQLQLAVLWPWLLMASLQAGLGRTGPALAAAVESERAAVQKAIIRVIPLKVEPIVL
EGEFASVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTMQAIRQLATR
KYQARCRQASRWDSASSCSSAPVCAICLEEFTEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSVDQATVAGSRLAPRDMEPGRRLHLFRQHPGHSLYHLPHPYPQRNLRS
FPSEPAHSNPFFHSPELSQLDFGTIHYMPYRPASSLPACGHASPLASGLRGQQHPSPPVC
GQPPHRTCSLQPTPPCLGLTAALAQRQHRAPIPRRGVSHGHQHNSSGSGESYLTEHSGYL
ADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSDGPTM
DNGPERQRALRETRPRSLDLMVPGGAAPAKAQVLNHIHYHHHQHHHYRREVECTPGRAGS
GPGQRKSRYSGAKVGFHSARTQKRAEKSHHCQQPLENRTELQEAPPVGQPACAQQGREPP
HASSASPNRLDFGVDANRQSGAAGTSPVLLPQRHSLQSRHHRRKRKCPLELDPALLPEDS
ALPKASDAHIPHGHPAGHRCSPEVQPLIPSSPMPCSTGSRPLWKCLVPQSSSELKKQEEG
MSGREGNRAVPAGFSGTGTPRHSLHLHCPAQQCGQGSEEEVQDVREHSV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggcccccagctgcagctggcggtcctctggccttggctgctgatggcttct
ctgcaggcagggctcggccgcaccgggccggcgctggcggcagccgtcgagtcggagcgg
gcagcggtgcagaaggccatcatcagggtgatcccgctgaaggtggagcccatcgtgctg
gagggggagtttgccagcgtggccgaggtcactcccgccgagggaaagctgctccagtcc
cacccgctgtccctgtgcaacaccagtgaggatgaacacacagagtcaggattcatcacc
atcgtcaagctcgagcagccggatcgggatcccaacccttgcctgtccctggctaacaag
gcaaagctggcaggggagcgtggagctcgtgcgatcctttttgacattaccgatgatgaa
agtgctgccgatcagctgagaaagcccagaggtctgagtcaacccgtggtgctgatcagg
ggccacgacgctgagctgctcatgggcgttgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggcctgactacgacgtgtggatccttctcactgtg
gtcagcactgttgtcgtcatcattttgatctttgtcgtccgtacaaagtgccagctgaac
aggacacaggactcggtacagcagcagaccatgcaggccatcaggcagctggccacgcgc
aagtaccaggccaggtgccggcaggcctcgcggtgggactcggccagcagctgcagctcg
gccccggtctgtgctatttgcttggaggagttcactgagggccaggaactgcggatcatc
tcatgctcccacgagtttcaccgggagtgtgttgacccctggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgcccgagactcagtggaccaggccacggtggca
ggctccaggctggctcctcgggacatggagcccggacggcggctgcaccttttccgccag
cacccaggacattccctttaccaccttccacatccctaccctcagaggaatctcaggagc
ttcccttcagagccagcccacagcaaccccttcttccactctccagagctctcccagctg
gattttggcacaatccactacatgccatacaggccagccagctccctgcccgcctgcgga
cacgcgtcccccctggcctccggtttgcggggccagcagcaccccagccctccggtgtgt
gggcaacccccccacaggacgtgttccctgcagcccacaccgccctgcctggggctgaca
gcagccctggcacagcggcagcaccgggcgcccatcccgcgccggggggtcagccatggg
caccagcacaacagcagtggctccggggagagctatctcacggagcacagcgggtacctg
gcagacggtccaggcagcgactccagctcggggccctgccacggttcttccagcgactcc
atgttgaactgcacagacatcagcctgcagggcatccatggcagctgctccactttccgc
agctccctcagcagcgactacgacccgtttgtgtactgcagctcagatgggcccaccatg
gacaacgggccggagcggcaacgggcgctgagggagacgcgacccaggtccttggacctg
atggtgcccggcggtgccgctccagccaaggcccaggtgctcaaccacatccactaccac
caccaccagcaccaccactacagaagggaggtggaatgcacacctggccgggctggctcg
ggccctgggcagcgcaagtcccgatactctggggctaaggttggctttcacagtgctcgg
acgcaaaagagggctgagaagagccatcactgtcagcagccactggaaaacaggacagag
ttgcaggaggctcctccagtgggacagccagcctgtgcccagcaaggtcgggagcccccg
cacgcctcctccgcttctcccaacaggttggacttcggtgtagatgccaacagacagtcg
ggagcagcaggcacgtcccctgtgctgctgccccagagacacagcttacagagccgacat
caccgaaggaaaagaaagtgtcccctggagctcgatcccgctctcctgcccgaggattca
gccttgcccaaagcctctgatgctcacattcctcacggccaccctgctggccaccgctgc
tcacccgaggtccaacccctgatcccaagctctcccatgccctgcagcacgggctcccgg
ccgctgtggaagtgtttggtgccacaatccagctcagagctgaaaaagcaggaggagggg
atgtcaggacgggagggaaaccgcgcggttcctgctggtttctcaggaacaggcacccca
aggcacagtctccacctgcactgcccagctcagcagtgtgggcagggatctgaagaggag
gtccaggatgtccgtgaacactcagtttaa
DBGET
integrated database retrieval system
