Tympanuchus pallidicinctus (lesser prairie-chicken): 128083513
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Entry
128083513 CDS
T08967
Symbol
CUX1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128083513 (CUX1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128083513 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
128083513
NCBI-ProteinID:
XP_052544800
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDATATILANRQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPPESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGS
ARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPS
LPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDV
NGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRR
NGSEGNITTRIRTTETGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSI
LQQARREMEAQQAALDPALKTTPLSQADISILSPKLVSTSAMSSVSSYPPLAISLKKHSS
VTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQ
HERRNTALPEDIKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSEL
SMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEK
LAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVL
PAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQ
QPCPSIETSKDGKSQEPSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRV
KEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV
EKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSTGIDYSQGASPQPQHQLKKPRVVLAPEE
KEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQ
AGSSDSPSARSSRAAHGSEGDSCDGVDAEGPPEGKPSGAEADEYSNATTKSQGGQAESAL
EAGEEAAPGARPTERAEPLLMAAEGLEDTDDEGRPRAPRQGSPAGCQHAGEAPETPPGSA
TEGDASTSAASTSVLTGESSYKSKESSEKSSSVPSTSSTPGAGSQKANSLQSLFSFSEAA
SSRSTRDSSLRKKKAANLNNIIHRLEKAASREEAAEWEF
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagaactcgatgccacagcaacaatattggccaaccggcaagatgaaagcgagcag
tccaggaagaaacttatcgagcaaagtcgggagttcaagaagaacactccagaggacctg
cgcaaacaggtagctccactactgaagagtttccagggagagatcgacgcattgggtaaa
agaagcaaagaagcagaggcagccttcttgaatgtttataagagattaattgatgtccca
gatccagttccagctttggatttaggacagcagcttcagctgaaggttcagcgaatgcac
gatattgaaacagagaaccagaaacttagggaaactctagaggaatacaacaaagaattt
gccgaggtgaaaaatcaggaggttacaataaaagcacttaaggagaaaatccgagaatat
gaacagaccctgaagaaccaagctgagaacatagctctggaaaaagaacaaaaattacaa
aatgatttcgcggagaaggagagaaaattgcaggagacacagatgtcgacagcctcgaag
ctggaagaagctgaacacaaagtccaagctttgcagacagccttggaaaaaaccagaaca
gaactgtttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgatgaaatc
gagatgatcatgacagaccttgaaagagcaaatcagagggcagaggtggctcagagagag
gcagagaccttaagggagcagctctcgtcagctaacaaatctctccaactcgctacacag
atccagaaggcacctgatgtggagcaggccatcgaggtgctgacaaggtccagcctggaa
gtagaactggctgcgaaggagagggagattgcccagctggtagaagatgtccagagacta
cagggcagcctcaccaagctgcgggagaactccagcagccagatctcccagctggagcag
cagctgaccgccaagaacagcacgcttaaacaactggaagaaaaactgaaaggacaggct
gattatgaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccacct
gaaagctctggtgcgcaggatgcatcgaaaccgctggaggtgctgctgctggagaagaac
cgctcgctgcagtcggagaacgccacgctgcgaatcacaaacagtgacctgagtgggtca
gccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcttcc
cctccttctcagttgctccgcaacgcgggggagcaggcttccaatactaatggtacacac
cagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcaagccccagc
ttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatg
cagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgattttttcaaca
ggtccttacagcacaaactccatctcttcccaaagtccattacaacaaagtccggatgta
aatggcatggccccatctcccagccagtcagaaagtgctgggagcatctccgaaggcgag
gagatagacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatatt
ggacagcggatatttggacattatgtgttgggactgtcgcaagggtctgtgagtgagata
ctagcccggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataag
atgaagcagttcctgtcggacgagcagaacatcctggctcttcgcagcatccagggtaga
caaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaaga
aatgggtctgaaggtaatataaccacacgaatccgaaccacagagactggctctgatgaa
gccatcaaatccattcttgaacaagccaaaagggagctgcaagtacagaaaacagctgag
ccggctcagccgccttctgcatctagcagtggcaattctgatgatgctattcgatccatt
ctgcaacaagcccgacgtgaaatggaggcacagcaggctgctcttgatcctgccttaaaa
acaacacctttgtctcaagctgacatttctatcctgtcccccaaactagtatctacatct
gcaatgtcttcagtttccagctatcctcctttggccatatccctgaagaaacattcatct
gttactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggagccgcag
gaggcgcctgttttagagcttcatggaataagtgattctgcccagggtatgttgaggcat
gttaaaaatgagttgggacgtggtggtgtttggaaagaccattggtggaatactgtgcag
catgagagaagaaatacagctcttcccgaagatataaaagttgaggaagccagtggtgga
aaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggaccatcttct
tcagagtattggaaagagtggccaaacgctgaatctccgtactcgcagagttctgaattg
agcatgactggggcgagtcgcagtgagacgccacaaaatagccccctcccttcatcccct
atcgtgtccttgtccaagccatccaaaccttcagttcctcctctgacacctgagcagtat
gagatttatatgtaccaggaagtggatacgatagaactaacgcggcaggtcaaagaaaag
ctagcaaagaatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaa
ggaagtgtcagtgacatgctctccaggccaaagccatggagtaaattgacacaaaaaggc
cgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctg
cccgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacaggattcc
ctacagcagggatgtgcaagctcagaaagcactccaaagacttctgccagttgcagtcct
gctcccgaatctcccatgagttccagcgaatcggtaaaaagcctgacagaattggtacag
cagccctgtccttctatagagaccagtaaggatggcaaatcccaggagcccagcgagccg
cctgcttccgaatcccagtccacaacccctttgccactgtcgggccactcagcactcagc
atccaggagctggttgctatgtccccagagctggatacgtatggcatcacaaaaagggtc
aaggaagtgctaacggacaacaatcttggtcagcgtttgtttggggagacaatcctgggg
ctgacacaaggctctgtctcagacctgctggctcgcccgaagccctggcacaagctgagt
ctgaagggccgggagccctttgtccgcatgcagctgtggctgaacgatcccaacaacgtg
gagaagctgatggatatgaagcgaatggagaaaaaagcctacatgaagcggcgacacagc
tctgtgagcgacagtcagtcgtgtgagtcctcctccactggaatcgactacagccagggt
gccagcccacagccacagcaccagctgaagaagccccgggtggtgctggcaccagaagag
aaggaagctctgaaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgag
gaactggctacgcagctcaacttgaaaaccagcaccgtgatcaactggttccacaattac
aggtctcgcatccgccgggagctgttcatcgaggagatccaagcgggaagccagagccag
gccgggtcgagcgattctccttcggcacgaagcagcagagcagcccacggctcggaggga
gacagctgcgacggcgtggacgcggagggcccacctgaaggaaagccgagcggcgcggag
gcggacgagtacagcaatgcaaccacaaagtctcagggagggcaagcggagtcggctctg
gaggcgggggaagaggcagcgccgggcgcccggcccacggagcgagcggagccgctgctc
atggcggccgagggcctggaggacaccgacgacgagggcaggcccagagcgccgcgccag
ggctctccggccgggtgtcagcatgcgggagaagctccggagacgccgcccggctccgcc
acggaaggggatgcctctacctcagctgcctccacctcagtccttacaggggagagctcc
tacaagtcaaaggagagttcagagaaaagctccagcgtgccaagtacgagttcgacgccg
ggcgcaggctcgcagaaagccaactctctgcagagcttgttcagcttctccgaggcagcg
agctccaggagcacacgagacagctccttgaggaaaaagaaagccgcaaacttgaacaac
ataatccaccgcttggagaaggccgccagccgggaggaggctgccgagtgggagttttga
DBGET
integrated database retrieval system
