KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128083535
Entry
128083535         CDS       T08967                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04512  ECM-receptor interaction
tpai04514  Cell adhesion molecules
tpai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128083535 (SDC1)
   04514 Cell adhesion molecules
    128083535 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128083535 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tpai04131]
    128083535 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:tpai04090]
    128083535 (SDC1)
   00535 Proteoglycans [BR:tpai00535]
    128083535 (SDC1)
Membrane trafficking [BR:tpai04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    128083535 (SDC1)
CD molecules [BR:tpai04090]
 Proteins
  128083535 (SDC1)
Proteoglycans [BR:tpai00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   128083535 (SDC1)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 128083535
NCBI-ProteinID: XP_052544855
LinkDB
Position
Unknown
AA seq 308 aa
MLRAVAVLLAALCFHAAVPQTTNLNLPPEDLDSSGDDDDGFSGSGAGPLPDQSLTWRTAT
DPTNSSLLATPGVFNEKLFPGIESRTEKKVTTPPATSRVVTEEPVVAVKDETPLLGSPDE
KPTDNTVVTTARSPTTRFPSVLHVTPSEASGTVRELKPKTPGSEMPGTKDVPETNSTTHP
EGDIAAAPTTAPGDLAPTHEEVSEVGSGDPGDFILIKDEDLFPTQDSEVPADSGRNAKAA
GASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKP
HKQEEFYA
NT seq 927 nt   +upstreamnt  +downstreamnt
atgctgcgcgcggtggccgtgctgctggcagcgctctgcttccacgctgccgtcccgcaa
actacaaatctgaaccttcctcctgaagatcttgattcttccggtgacgacgatgatgga
ttctcaggttcaggtgcaggtcccctacctgatcagtctctcacttggagaacagcaaca
gatccgactaattcctcattactggcaacaccaggggttttcaatgaaaagctgtttcct
gggattgagagccgaactgaaaagaaagtaacaactccacctgcaactagtcgtgtagtg
acagaggagccagttgtagctgtgaaggatgaaacacccttgttgggctcacctgatgag
aagcccacagacaacacagttgtaacaacagcaagaagtcctactactcgcttcccttcg
gtgcttcatgtaactccttcagaagcctcaggcacagtccgtgagctcaaacctaaaacc
cctggctctgagatgccaggcactaaagatgtgcctgagaccaactctaccacccatccg
gagggggacatcgctgctgctcccacaacagctccaggcgaccttgctcctacacatgag
gaggtttctgaagttggctcaggagacccgggagacttcatcttgattaaagatgaggac
ttgttccctacccaggattctgaagtgccggctgactctgggaggaatgccaaagcagcg
ggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctggaggactg
gttggcttggtgttcgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaa
gacgaaggaagctattcactggatgaaccgaaacagtctaacggaggataccaaaaacca
cacaaacaagaagagttctatgcataa

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