Tympanuchus pallidicinctus (lesser prairie-chicken): 128083584
Help
Entry
128083584 CDS
T08967
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpai03009
]
128083584 (DDX52)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128083584 (DDX52)
Ribosome biogenesis [BR:
tpai03009
]
Eukaryotic type
90S particles
Helicases
128083584 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
CC2D2AN-C2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128083584
NCBI-ProteinID:
XP_052544964
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MEAQELFRRLGAGARFDVQRFGRDARRFGVIRGSGGTPENLDFFGRKEGGASLGSAGKQE
DGAGRKDVEMAGKRKRTAESGQRKRKKIQEAVSMPELSESGGIMWMSSLEAKVKDTKDNK
KPTAEKLERLRREKINRFRNQHRINIQGTDLPDPIATFDQLQKEYKVHPKVIENIQAAGF
QVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRE
LAGQTHRELVKLAEGTGFRIHMIHKASEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP
AIDLTSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSHVVRRAFFSATFARDVEEWCK
LNLDSIVLVTVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPPVLVFVQSIERA
KELFHELIYEGINVDVIHADKTQQQRDNVVHSFRAGKIWVLICTALLARGIDFKGVNMVI
NYDLPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLLRSIASVIQRAGCPVPDYIKHF
PKLQSKQKKKFIKKPLTREAICTTPQCFLKKDRRKKRTAKENVKEKKKVKEVTNNSNLKT
ASES
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagctgttccgccgcttgggcgccggggctcgtttcgacgtacagcgc
ttcgggcgggacgcgcggcgcttcggggtgatccggggaagtggcggcacaccggagaac
ctcgacttcttcgggcgcaaggagggaggagcctcactggggtccgcggggaagcaggag
gatggagcgggaagaaaggatgtggagatggcggggaagagaaaaaggacggcagaaagt
ggccaaaggaaaagaaaaaagatacaagaagcagtgtcaatgccagagctgtcagaaagc
ggtgggataatgtggatgtcctctctggaagcaaaagtcaaagatacaaaagacaacaaa
aaacctactgcagaaaagcttgaacgtttgagaagggagaagataaaccgtttcagaaat
caacacaggattaacattcaagggacagatcttcctgacccaattgccacgtttgatcaa
cttcagaaggaatacaaagtccaccccaaagtcattgagaatattcaagctgctggcttc
caggttccaacgccaatccagatgcaggccattccagtcatgcttcatggccgagaactt
ctagcttctgctcctactgggtctggaaaaacactggcattttgtattcctctcttaaca
cacctgaagcaacccatgaacaaaggattcagagccctgatcatatcgcctacccgggaa
cttgctggccagacgcatcgggagttggtgaagttggctgaggggacaggcttcaggatc
cacatgatccacaaggcctctgaagcagcaaagaagtttgggcccaagtcgtctaagaag
tttgatatattagttactactccaaacagactcatctatttactgaaacaagatcctcca
gcaatagacttgaccagcgtggagtggctggtggtggatgagtcagacaaactgtttgaa
gatggaaagtcaggattccgagagcaattggcctccatcttcctggcatgcacgtcccat
gtggtgagaagagcctttttcagcgcaacctttgcacgtgatgtggaggagtggtgtaaa
ctcaaccttgacagtattgttctggtgactgttggtgcaagaaactctgcagcagagacg
gtggaacaagagctgttgtttgttggatcagagacaggaaaactgacagcaatgagagag
cttgttaaaaagggttttgctcccccagtccttgtttttgtacagtctattgagagggct
aaagagcttttccatgagcttatttatgaaggcatcaacgtagatgtcatccatgcagac
aaaactcaacagcagagagataatgtagtgcacagtttcagagctgggaagatctgggtg
ctcatttgcacagctttactagctcgagggattgatttcaaaggagttaatatggtcatt
aattacgatttgccaacaagtgcagtggaatacatccacagaataggtcgtactggaaga
gcaggacacacagggaaagcagtcactttctttacagaagatgataagcctttattacga
agcatagccagtgttatccagcgagctggctgtcctgtgccagactacataaagcacttt
cccaaactccaaagcaaacagaagaagaaattcattaagaaaccactaacgagagaagca
atttgtaccactcctcagtgcttcttaaaaaaagacagaagaaaaaagagaactgcaaag
gaaaatgttaaggaaaagaagaaagttaaggaagttacaaataacagtaatttgaagact
gcttcagaaagctga
DBGET
integrated database retrieval system
