Tympanuchus pallidicinctus (lesser prairie-chicken): 128083668
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Entry
128083668 CDS
T08967
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128083668 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128083668 (TRPV1)
Ion channels [BR:
tpai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128083668 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
128083668
NCBI-ProteinID:
XP_052545139
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MFIMSSILEKMKKFGSSDIEESEVTDEHTDGEDSALEAPDNLQGTFSSKVQPSRSNIFAR
RGRFVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHANMERGKLHKLLSTDSITGCSEKAFK
FYDRRRIFDAVAQGNTKDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKN
DTIPLLLDIAKKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHAR
ACGEFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQAADIAAEDSMGNMVLHT
LVEIADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFA
YILRREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEIIAYSSETPVSMY
FLDVYLQTGDCWRRALCSTQYIFCVISVKQQLVLEEAFAKIEHHLLFLKPSAYGTCQGSP
LYLSTQNRHEMLLVEPLNRLLQDKWDRFVKHLFYFNFFVYAIHISILTTAAYYRPVQKGE
NPPFTFGHSTGEYFRVTGEILSVLGGLYFFFRGIQYFVQRRPSLKTLIVDSYSEVLFFVH
SLLLLSSVVLYFCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCR
FMFVYLVFLLGFSTAVVTLIEDDNEGQDTNSSEYARCSHTKRGRTSYNSLYYTCLELFKF
TIGMGDLEFTENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQ
RAITILDIENSYLNCLRRSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIIN
EDPGCSGDLKRNPSYSIKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEIKLKPILEPYY
EPEDCETLKESLPKSV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgtcttccattcttgagaagatgaagaaatttggcagttctgacatagaa
gaatctgaagtgacagatgaacacacggatggggaagactctgcattggaagcacctgac
aacctgcagggtacattcagcagcaaggtgcagccatccagaagcaatatctttgcaaga
cgtggacgatttgtgatgggggatagtgacaaagacatggctccaatggattccttttac
cagatggatcacctgatggcaccttctgtcatcaaatttcatgccaatatggagaggggg
aaacttcacaagctcctgtcaacagattccatcacaggctgctctgaaaaagctttcaaa
ttttatgaccgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctggat
gacctgctgctctatcttaacaggaccttgaagcatctcacagatgatgaattcaaagaa
ccagaaactgggaaaacctgcttactgaaagccatgctgaatctacatgatgggaaaaat
gataccattcccttgctgctggatattgcaaagaaaacgggaactctgaaagagtttgtg
aatgcagaatatactgacaactactacaagggccagactgcactccacattgccattgag
agaaggaacatgtacctggttaaactcttggtccagaatggagcagatgttcatgcaaga
gcatgtggggagttcttcaggaaaatcaaagggaaacctggtttttattttggagagctg
cccctgtctctggctgcctgcaccaatcagctctgcattgtgaaattcctccttgagaac
ccctaccaggctgctgatattgctgctgaggactccatgggcaatatggtcctgcatact
ctggtggagattgcagataacactaaggataataccaagtttgttaccaagatgtacaat
aacatattgatccttggtgccaaaataaatcctatcctgaagttggaagaactcaccaac
aaaaaagggctgactccattaacattggcagccaaaacagggaagatagggattttcgct
tacatcctcagacgagagatcaaagatcctgagtgcagacacttgtcaaggaagttcact
gaatgggcttatggacctgtccactcatctctttatgacctgtcctgcatagacacatgt
gagaaaaattcagtgcttgaaattattgcctacagtagtgaaacaccagtaagtatgtac
ttccttgatgtttatttgcagactggggactgctggagaagagctttgtgttctacacag
tacatcttttgtgtcatttctgtaaaacaacaacttgtattagaggaggcatttgctaaa
attgagcatcacttgctatttttaaagcccagtgcatacggaacctgtcaaggttctcct
ctttatctttccactcagaatcgtcacgagatgctgctggtagaaccccttaacaggctg
ctgcaagacaagtgggaccggtttgtcaagcacttattttacttcaacttcttcgtatat
gcaattcatatcagcatcctgactacggctgcctactacagacctgtgcagaagggggaa
aatcctcccttcacttttggtcacagcactggggaatattttcgagtgactggagagata
ctgagcgtactgggaggactgtatttttttttcagagggatacagtattttgtgcagagg
cgcccatcattgaagacactgatagttgacagttacagtgaagttcttttctttgttcac
tctttgctcctcctgagctctgtggtgctgtacttctgtggccaggaactgtatgtggct
tccatggtcttctccttggctctgggctgggctaacatgctatactacacccgtggcttc
cagcagatgggcatttactctgtcatgattgcaaagatgatcctaagagacttatgtcgc
ttcatgtttgtctatctagtattcctcttgggattttccacagctgtggtgactttaatt
gaagatgacaatgaggggcaggacacaaatagctctgaatatgcccgatgcagccataca
aagcgaggccgcacatcctataacagtctgtattatacctgcttggaactcttcaagttc
actattgggatgggagacctggagtttacagagaactacaggttcaagtccgtgtttgtc
atccttctggttctctatgtcatccttacgtacatcctcctgctcaatatgcttattgca
ctgatgggagaaactgtgagcaaaattgcacaggagagcaagagcatctggaaactccag
agagccatcacaatcttggatattgaaaacagctacttgaactgtttgaggcgctcgttc
cgatctggaaagcaagtcttggtggggatcacacctgatggccaagatgattacagatgg
tgctttagagttgatgaagtgaactggtccacgtggaatactaatttgggcataatcaac
gaagatcctgggtgctctggggacctcaaacgaaatcccagttactctattaagcctggt
agagtttcagggaaaaactggaaaactttggttccgcttttaagagatggaagcaggaga
gaggaaacacaaaaacttccagaagaaatcaaactaaaacctattttggaaccttattat
gagccagaggattgtgagacgttgaaggaatctcttccaaagtcagtctga
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