Tympanuchus pallidicinctus (lesser prairie-chicken): 128083731
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Entry
128083731 CDS
T08967
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128083731 (SUPT6H)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128083731 (SUPT6H)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
128083731 (SUPT6H)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
128083731 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
128083731
NCBI-ProteinID:
XP_052545227
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWSVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDTEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQAQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtagaaagtgaagcagaggagtcagaggaggagtacaaccaggatgga
gaggttgttcccagagtaaccaagaaatttgtagaagaagatgaggatgatgaggaagag
gaggaggagaatcttgacgatcaagatgagcaagggaacctgaaaggattcattaacgac
gatgatgatgaggaagaggaagaggaggaagaagccagtgactctggggactctgaggat
gatgttggccataaaaagagaaagcgcacttttgatgaccgcctggaggacgatgatttt
gacctcattgaagagaacttgggtgtaaaagtcaaaaggcaaaaattcaggcgtgtgcgg
aaaatgtctgatgatgaggatgatgaagaggaggactatggtaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaggatggcgaaggcgaggagggaggggaagctgtt
gaagctcctgttgcaccaccagaagaggaagaggaggaggaagaagatgaatctgacatt
gatgacttcattgtggatgatgatggacaacctctgaagaagccaaaatggaggaagaag
ctcccaggatacactgatgctgctttgcaggaagcccaggaaatctttggtgtggacttt
gactacgatgagtttgagaagtacaatgagtatgatgaggagatggaggaagaatatgaa
tatgaggatgaagaagctgaaggagaaacccgtgtccgacccaagaagactgccaagaaa
cgtgtcagtcggcgaagcatctttgagatgtatgagcccagtgagctggagagcagtcac
ctaacagatcaagacaatgagatccgaatgacagacatgcctgagagattccagttgaga
tccatccctgtaaaaagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaatgcatttgcaacacccaccatttccttgcaggaaagttctgactaccttgatcgt
ggacaagccagcagcagcttcagccgcaagggacccagcaccatccagaagattaaagaa
gccctgaattttatgagaaatcaacattttgaggtgccattcatcgccttctacagaaag
gagtacgtggaaccagagctgcacatcaatgacctctggagtgtgtggcagtgggatgag
aagtggacccagctgaagatccgcaagcaaaacctgacacgtctgtttgagaagatgcag
gcctaccagtatgagcagatctctgctgacccagacaagcctttggctgatggaataagg
gctcttgatactactgatatggagaggctgaaggatgtgcagtccatggatgagctgaaa
gatgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gcaaaggctgctcgaaagaagcaaaagcgtatccgagaagatggtgaagaggaagaaggt
gaaggggaggatgcagaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaaaaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccaacgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggactacgtgtgtagtcaattcccaagc
ccagaagctgttctggaaggagcacggtacatggtagcattgcagatagccagggagcct
ttggtcaggcaggttctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattccttcaaatacttg
aagaacaagcctgtgaaggagctgcgagacgaccagttcctgaaaatgagcctggcagag
gaggaggcactgctgactatagacatcagcatagacatgaaaggagtggagggttatggt
agtgaccagacatactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaggaatggaatcggcagcgtaccatggccattgagcgatccctcaaccagttc
ctctatgtgcagatggctaaagagctgaagaacaagctgctggtggaggccaaggagtat
gtcctcaaggcttgcagccgcaagctgtacaactggctgaaagtagcttcataccgtcct
gatcaacaagtggaggaagatgatgatttcatggatgaaaaccaagggaaaggaattcgg
gtgctaggcattgcattttcctcagccagggaccaccctgtgttttgtgccctcgttaat
ggagagggtgaggttacagacttcctccgactgccacatttcacgaagagaaggaatgct
tggcgtgaggaagagagggaaaagaaggcacaggatattgaaaccttgaaaaaattcctt
ttgaacaagaagcctcacgtggtcacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagaggattgttcatgaactggatcaggggcagcagctgtcctctatt
ggagtagagctggtagataatgaactggccatcctctacatgaacagcaagaaatctgag
aatgagttccgggattacccacctttgttacgccaagcagtttccctcgctcgtcgcatt
caggaccctctcgtagagtttgctcaggtctgcagctctgatgaggatattctgtgcctg
aaactccatcctctgcaggagcatgtggtgaaggaggacctgctgaacgccctctactgt
gaattcataaaccgtgtgaatgaggtgggagtggatgtcaatcgggcaattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttgaaacaaaacaacacacgtctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgtttatcaactgtgcaggcttcatcaaaattgacacagca
tcgctgggcgatagtactgattcctacattgaagtcctagatggctccagggtccatccc
gaaacctatgagtgggcaagaaaaatggcagtagatgccttagaatatgatgagtcagct
gaggatgcgaatcctgcaggagctttagaggagatcttggaaaaccctgaacgactgaag
gacctggatctcgatgcctttgctgaagagctggaaagacagggctatggtgacaagcac
ataactctgtatgacattcgagctgaactcagctgcaggtacaaggacctcaggacccca
taccgttctccaaatacagaagaggtcttcaatatgctgaccaaagagactccagagact
ttttatattggtaaaatgatcatctgcaacgtgactgggatagcacacaggcggccacaa
ggagaaagctatgaccaggcaatacggaacgacgaaactggtctttggcagtgtcctttc
tgtcagcaggataacttcccagagctcagtgaggtttggaatcactttgacagtgggtcc
tgcccaggtcaggccattggagtgaagacacgtctggataatggtgttgctggcttcatc
ccaacaaaatttctaagtgataaggtggtcaaacggcctgaagaaagggtgaaggtggga
atgactgttcactgcaggattatgaagatcgacatcgagaagttcagcgcagatctgacc
tgcaggacctcagacctgatggataagaacaacgagtggaaactgcctaaagacacctac
tatgactttgatactgaggcagcagatcacaaacaggaggaagacatgaagagaaagcag
cagcggacaacgtacatcaagagagtaattgctcacccatcattccacaacatcagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggatgtgattattcggccaagc
agcaaaggggagaaccacctcactgtcacctggaaggtgaatgatggcatttaccagcac
gtggatgttcgagaagagggcaaggagaacgccttcagcctgggctctacgctgtggatt
aacacagaggagtttgaagacttggatgaaattgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggattgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctac
tttattagtgcttgtaaagatctacctggcaaattcctcttgggttatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacaccagaaggattccgctaccggggccaggtc
ttccctacagtgaacggactcttccgatggtttaaggatcattatcaggatcctgttcca
ggtattactcccagcagtagcagtcggaccaggactccagcctccattaatgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaacgctctaccccagaacatgact
tcccagatgttcagtgccattgctgctgtgacagggcaagggcagaacccaaatgccacc
cctgcacagtgggcatccagtcagtatggctacggaggcagtggaggtggcagcagcgcg
taccacgtcttcacaactccagcgcagcaaccagtggccacccctctgatgacccccagt
tactcctacaccacccccagccagccgatcacaacgccccagtaccagctccaggccaac
accacaccgcagtccacgcagtcccaggcacagtcgcagccctcgtccagttccagacag
aggcagcagccaaagaccaacagtcacgctgccatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgagcggaggaaacagaagcagaggttgactcctcgcccg
tctcccagccccatgattgagagcacacccatgtccatcgccggggacgccacgccgctg
ctggatgagatggaccgatag
DBGET
integrated database retrieval system
