Tympanuchus pallidicinctus (lesser prairie-chicken): 128083964
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Entry
128083964 CDS
T08967
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128083964 (LHX5)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
128083964 (LHX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
128083964
NCBI-ProteinID:
XP_052545581
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPHGP
PSQAQSPADPSYLQNSGPGSTPLGSLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMTGS
LHPIPGEVFSGGPSPPFSMSSNSGYSGALAHPNPELSEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccgcttcctgctgaatgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaaatgcaacctgacc
gagaaatgcttctccagggaaggaaaactctactgcaagaatgactttttcaggaggttt
ggcaccaaatgcgccggctgctcccagggcatctcccccagcgacctcgtccggaaagcc
cggaacaaagtgttccacctgaactgtttcacctgcatggtttgcaacaagcagctctcc
acgggcgaggaactgtatatcatagacgaaaacaaatttgtttgcaaagaggactatttg
aactctcccagtttgaaggaaggcagcctcaactcagtgtcctcatgtacagacaggagt
ttgtccccggatctccaggaccccatgcaggacgacaccaaggagacggacaactccacc
tcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcaccaagcgg
cgaggaccccgcaccaccattaaggccaagcagttggagaccctcaaagctgctttcgca
gccacccccaagcccacccggcacatccgcgagcagctggcccaggagaccggcctcaat
atgagggtcatccaggtctggttccagaaccgccgatccaaggagcgccggatgaagcag
ctgagcgcgctgggcgcccgccggcacgccttcttccgcagcccgcgcaggatgcggccc
ctgggcggccgcctcgacgagtccgagatgctcggctcgacgccctacacgtactacgga
gattaccaaggtgactactacgggccgggaggcaactatgactttttcccccacgggccc
ccctcccaggcccagtccccggccgaccccagctaccttcagaactcaggacccggctcc
acgcctctgggatccctggagccccccctaagcggacaccactcctcagaaaaccaaagg
tacacggatatgatctcgcaccccgacacccccagccctgagccagggatgacgggctcg
ctgcaccccatcccgggggaggtcttcagcggggggcccagtccgcccttctccatgtcc
agcaatagcggctacagtggggccctcgcgcaccccaatccggagctgagtgaggcagcg
gtgtggtag
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