Tympanuchus pallidicinctus (lesser prairie-chicken): 128084054
Help
Entry
128084054 CDS
T08967
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03030
DNA replication
tpai03410
Base excision repair
tpai03420
Nucleotide excision repair
tpai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128084054 (RFC5)
03410 Base excision repair
128084054 (RFC5)
03420 Nucleotide excision repair
128084054 (RFC5)
03430 Mismatch repair
128084054 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpai03032
]
128084054 (RFC5)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128084054 (RFC5)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128084054 (RFC5)
DNA replication proteins [BR:
tpai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128084054 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
128084054 (RFC5)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128084054 (RFC5)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128084054 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
128084054 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_24
AAA_11
AAA_assoc_2
AAA_14
DEAD
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
PhoH
AAA_7
DNAX_ATPase_lid
TIP49
ATPase_2
TniB
nSTAND3
Mg_chelatase
Gp44_lid
Thioredoxin_6
AAA_25
bpMoxR
AAA_3
NPHP3_N
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
128084054
NCBI-ProteinID:
XP_052545792
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAGPCGRNLPWVEKYRPRALSELVSHRDILSTIQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKADIANIL
DWMLNQNFSTAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKVQLSSLIAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgtgcgggaggaacctgccgtgggtggagaagtaccgtccgcgggcgctg
tcggagctggtgtcgcaccgggacatcctcagcaccatccagcggttcatcagtgaggac
aggctgccccacctcctgctctatggcccccccggcaccgggaagacctccaccatcctg
gcttgtgcacggcagctctaccgcgagcgggagttcagctccatggtgctggagctgaat
gcatcggatgaccgcggcatcgacatcgttcgagggcccatcctgagctttgccagcacc
aggaccatcttcaagaaaggcttcaagctcgtcatcctggatgaagctgatgccatgaca
caggatgcacagaatgctctgcgacgagtgatcgagaagttcaccgagaacacccgcttt
tgcctcatctgcaactacctctccaagatcatccccgccctgcagtcccgctgcacccgc
ttccgcttcgggcccctcaccccagagctgatggtgccccggctgcagcacgtcatccag
gaggagggggtggacgtgagtgaggatgggatgaaggcgctggtgacgctctcgagcggt
gacatgcgcagagccctcaacatcttgcagagcacctccatggcctttgggaaagtgacg
gaggagaacgtctacacctgcacaggacaccccctcaaggctgacatcgccaacatcctc
gactggatgctcaaccagaacttctccaccgcctaccgcaaaatcatggagctgaagaca
ctgaagggcctggctctgcaggacatcctcaccgagatccacctctttgtgcacagagtt
gatttcccaccctcagtccgcatccagctgctgatcaagatggcagacattgagtaccgg
ctggctgcaggcaccagcgagaaggtgcagctgagctccctcatcgcagcattccaggtc
accagggacctgatcgtggccgaagcgtga
DBGET
integrated database retrieval system
