Tympanuchus pallidicinctus (lesser prairie-chicken): 128084140
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Entry
128084140 CDS
T08967
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128084140 (HNF1A)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128084140 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
Homeobox_KN
KPBB_C
Motif
Other DBs
NCBI-GeneID:
128084140
NCBI-ProteinID:
XP_052545947
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MVSKLSHLQVELLGALLESGLTKETLIKALSEVEPYMLQSESQHAINALQTEKGESCPEI
PNLPNGMGETRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGILTEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDNFSGPQPTSAPPL
TPHNSSSLQPPPALSPTKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGL
EPSQNLLSTDTKLISAPGGTLPPVSTLTALHSLEQNPHALGQQTQNLIMASLPGVMAIGA
GETSSLAPAFTNTGGSTLVIGLTSTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPL
MQQVQSHINQSPFMATMAQIQNPHALYGPKSEVAQYTHTGLLPQTMVITDTANLSALTNL
TPTKQAFTSDSETHTDSGIHTPVSQAPAIHLQNQDTTIQHLQSGPRLTSSPAVSSSSLVL
YQSSDSTNSHSQLLPSTHNVIETFISTQMASSTQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgagccatcttcaagtggagctgctgggagcgctgctggagtcgggg
ctaaccaaggagaccctgatcaaggcactgagcgaagtggaaccctacatgctccagagt
gaaagtcagcatgctatcaatgccctgcagacagagaaaggggagtcctgccccgaaatc
cccaatctccccaatggaatgggcgaaaccaggttgtcggaagatgaaacctctgatgac
ggggaggaatttacccctccgataatgaaggagctggaaaacttgagccctgaggaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgggtagcaaag
atggtgaaatcctacctccaacagcacaacatccctcagcgcgaggtggtggacacgact
ggcctgaaccaatcccacctctcacaacacctcaacaagggcactcccatgaagacccaa
aaaagggcagccctctacacctggtacgtccgcaagcagcgagaggtggcccagcaattc
acacatgctggtcaggggatcttgacagaggagcccatgggagatgatctgcccaccaag
aagggacgaagaaatcgctttaaatggggtcctgcctcacaacagattctgttccaagcc
tacgagagacaaaagaaccccagcaaagaagagagagaggcactggtggaagagtgcaac
agagcagaatgtattcagagaggcgtttccccatctcaggcccagggtctgggttcaaac
ctggtgaccgaggtgcgagtttacaactggtttgccaaccgcaggaaggaggaggccttc
cggcacaagctggccatggacaacttcagcgggccgcagcccacctctgctccccctctc
actcctcacaactcctcctcccttcagccgcctcctgctctctcacccaccaaagttcac
ggagtgaggtacaaccagcagccagccagcgaggcagagtcctccagcagcaaccaccac
gggaacagctccatggtgaccacccaaaccatcctgcatcaggtttctccccctgggctg
gagcccagccagaacctgctgagcacagacaccaagctgatctcagctcccggaggaact
ctgccccccgtcagcaccctgactgccctgcacagcctagagcaaaacccccacgcgctg
ggccagcaaactcagaacctcatcatggcctcactgcccggcgtgatggcaatcggagct
ggtgagacctcatccctggcgcctgcattcaccaacaccggcggctccaccctggtaata
ggcctgacttcaacccagccccagagtgtacctgtgataaacagcatggggagcagcctc
accaccctgcagccagtccagttctcccagcagctgcacccgtcctaccagcagcccctc
atgcagcaggtccagagccacatcaaccagagccccttcatggctaccatggcccagata
cagaacccccatgctctctacggccccaagtctgaagtggcccagtacacacatacaggc
ctcctcccacaaaccatggtgataacagacacagccaatctcagcgcgctgactaacctg
acaccaactaaacaggcattcacatctgactcagaaacccacacagactctgggatccat
acaccagtatcgcaggcaccagcgatacacctacagaaccaagacacaaccatccagcac
ctgcagtctggtcctcgcctcacctcaagccctgctgtgtcctccagcagcctggtgctg
taccagagctctgactccaccaacagccacagtcagctgctgccatccacccataacgtc
attgagaccttcatctccacgcagatggcatcctccactcagtaa
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