Tympanuchus pallidicinctus (lesser prairie-chicken): 128084252
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Entry
128084252 CDS
T08967
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpai01009
]
128084252 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128084252 (SH3RF1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128084252 (SH3RF1)
Protein phosphatases and associated proteins [BR:
tpai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128084252 (SH3RF1)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128084252 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
128084252
NCBI-ProteinID:
XP_052546127
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCSV
DELPSNILLVRLLDGIKQRPRKPGTVGGTGGANNLRVPITANCGSKDLQSSQAGQQQRVQ
ARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIHGFFP
TNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGMLAD
KIGIFPISYVEFNTAAKQLIELDKPSGSAVDSGEGTSGAALNNSVQKHSDTKKNTKKRHS
FTSLTMSNKSSQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTTGL
IVTPPPSSPVTTGPSFTFPSEVTYQAALGNMNPPLPPPPLSAAVVASASSGPQPAGIIQR
SASGSADQMAHLRPQTRPSVYIAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGTSMH
TSKIGVFPGNYVAPATRTVTSASQTKVPMSTAGQTGRVVTVSPSSAGGTSQKLQGNGVAV
NSSTVPTAVVSAAHIQTSPQTKVLMHVTGQMTVNQARNAVRTVAVHSQDRPTAAVTPIQA
QSQTCLIPAAVIIPHHSVASQQLQSQLPNTAAYVTAVNVNRSAIPLACAAASLNSPNVAA
SSLEGDLSGRTVNTHPVAPASPESSLAAGGSAAVSKTDKDVKKEKKGLLKLLSGASTKRK
PRLSPPASPTLEVEQAAAELALQGAVGPELPSAGGHSRAGTCPTDCEVSGPAQEMLQRKA
SSLDSAVPVAPPPRLPCSSLGPVLNESRPLVCERYRVVVSYPPQSEAELELKEGDIVFVH
KKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcggctctgctggatctgttggagtgccccgtgtgcttggagcgcctcgat
gcctcggcgaaagtcttgccttgccaacacacgttctgcaaacgctgcctgctgggtatc
gtcagctctcggaacgagcttcgctgccccgagtgcaggactttagtggactgcagtgtt
gatgaacttccgagcaacattttgcttgttagactactggatggcatcaaacagcggccg
cggaagcctggcactgttggtgggaccgggggtgcaaataatttaagggtccccatcact
gctaattgcggatccaaggacctgcagagctctcaggctgggcagcagcaaagggtgcaa
gcacggagccctcctgttaggggtgtacctcagttaccatgtgccaaagcattgtacaac
tatgagggaaaagaacctggagatcttaagttcagtaaaggagacatcatcattttgcgt
cgacaggtggatgaaaattggtatcatggagaagtcaatggcatccatggcttttttcct
accaacttcgttcagattattaaacctttacctcaacctccgcctcagtgcaaagcactt
tatgactttgaagtaaaagacaaggaagcagataaggactgtttgccatttgcaaaggat
gatgttctgactgtaattcgccgagtggatgaaaactgggcagaaggaatgctagctgac
aagataggaatatttccaatctcatacgttgagtttaacacagcagccaagcagctgata
gagttggataagccctcaggttctgctgtagactccggagaaggtacctctggggcagcc
ctcaacaattcagtccaaaagcacagcgatacaaagaaaaacaccaaaaaacggcactcc
tttacctccctcactatgtccaacaaatcctcacagtcttctcagaatcgccactcgatg
gaaattagtcctcctgtcctcatcagctccagcaacccaactgcagcagcacgcataagt
gagctgacgggactttcttgtagtgccccttctcaggttcatatcggtactacagggctg
attgtgactccaccccctagcagcccagtcacaacagggccttcatttaccttcccatca
gaagttacctaccaagctgctcttggtaatatgaatccccctcttccacctccacctctg
tctgctgcagttgttgcatcagcctcttctggacctcagcctgcaggtataattcaaagg
tctgcgtcaggatcagctgaccaaatggcacatttaagaccacagactcgtcccagtgta
tatattgctatatacccttatacccctcgaaaagaggatgaactggaactgcggaaggga
gaaatgttcttggtatttgaacgctgtcaagatggctggttcaagggaacttccatgcat
acgagcaagattggtgtttttcctggcaactacgtggctccagctacgaggacagtgaca
agtgcatcacaaacgaaagttcccatgtctactgctggtcaaacaggacgagtggtgact
gtcagcccttccagtgctggtgggacatctcagaagctccaggggaacggtgtggcagtg
aactccagcaccgtacccacagctgtggtttctgcagcacatatccaaactagcccgcaa
accaaggtccttatgcacgtgacaggacaaatgacagtcaaccaggctcgcaacgcagtt
agaacagttgctgtacacagtcaagaccggcctacagcagcagtcacacccatacaagca
caaagtcaaacatgccttattcctgcagctgtgatcattccccaccattctgttgcctcc
cagcagctccagtcccaacttccaaatactgctgcttatgtcacagctgtgaatgtgaac
cgttcagccatcccactggcatgtgcagcagcttctttgaattctcccaacgttgctgct
tcatctttggagggagatctaagcgggagaactgtgaacactcaccctgtggctcctgca
tctccagagagctctttagcagctggtggtagtgctgctgtcagtaaaacagacaaggat
gtcaagaaagaaaaaaagggtttgctgaaactgctttctggagcatccactaaacgcaag
ccacggttgtcacctccagcatctccgactctggaggtcgagcaagcagccgcagagtta
gccctgcaaggtgcagttgggccagagcttccatcagcaggaggtcacagcagagctgga
acctgtcccactgactgtgaggtctctgggccagcgcaggagatgctgcagcggaaagcg
agttccctggattctgctgttccggtagcaccaccaccacggctgccttgctcgtccctg
ggtccggtcttgaacgagtccaggcctcttgtctgtgaaaggtacagagttgtggtatcc
tatcctcctcagagtgaagcagaacttgaacttaaagaaggtgacattgtatttgtacat
aaaaaacgtgaggatggctggttcaaaggcactctgcaacgaaatggaaaaactggcctt
ttccctggcagctttgtagagaacatttga
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integrated database retrieval system
