Tympanuchus pallidicinctus (lesser prairie-chicken): 128084335
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Entry
128084335 CDS
T08967
Symbol
TRIM2
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128084335 (TRIM2)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128084335 (TRIM2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
TEN_NHL
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Prok-RING_4
ANCHR-like_BBOX
Mala_s_1-like
PAF-AH_p_II
zf-RING_11
ChuX_HutX
Motif
Other DBs
NCBI-GeneID:
128084335
NCBI-ProteinID:
XP_052546235
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MASEGSNIPSPVVRQIDKQFLICSICLDRYKNPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVSALQNNFFITNLMDVLQRTPENSIEESSILETVTAVAAGKPLSCPN
HDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDSVNKRLPEID
SALHFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQTQ
LDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSDKLNELAERDFPLQPRENDQLD
FIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTVIGQPMSVTITTKDKDGELCKS
GNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIKGSPFKLK
VVRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKG
RNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGHFKSRFGIRGRSPGQLQRPTGVA
VHPGGDIIIADYDNKWVSIFSSDGKFKAKIGSGKLMGPKGISVDRNGHIIVVDNKACCVF
IFQPNGKIVTRFGSRGNGDKQFAGTLDGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFI
LKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGP
QGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaaggctccaacatcccaagtcctgtggtccgtcagattgacaagcagttt
ctgatttgtagcatatgcctggaccgctacaagaaccccaaagtacttccctgtctgcac
actttttgtgaaaggtgcttacagaattacattccagcccatagcttaaccctttcttgc
cccgtgtgccgccagacttccattctgccagaaaaaggggtttctgcactccagaacaac
ttctttatcaccaacctgatggatgtcctgcaacgaacaccggagaacagcattgaagag
tcctccatcttggagactgtcactgctgttgctgcaggcaaaccgctttcctgccccaat
cacgatggaaatgtgatggagttttactgccagtcttgtgagacagccatgtgcagggag
tgtacagagggagaacatgcagagcatcccacagtaccactcaaggatgtggtagagcaa
cacaaggcttctcttcaagttcagttggattctgtcaacaaacggcttccagagatcgac
tcagcacttcattttatatctgaaatcatacaccagttaaccaaccaaaaggctagcatc
gtagatgacattcattccacttttgatgaactccagaagaccttaaatgtacgaaaaagt
gtgctgcttatggaactggaagtgaattatggccttaaacacaaagttctccaaacccag
ctggataccttgcttgaaggacaagagagcattaaaagttgcagcaactttacagcccag
gccctcaaccatggcaccgaaactgaagtgctgttggtgaagaagcagatgagtgacaag
ctgaatgaactggctgagagggatttccccttgcagccccgtgaaaacgatcagttggac
ttcatagtggaaacggaaggcctgaaaaagtccattcacaatttgggcactattttaacc
accaatgctgttgcctctgaaacagttgccacaggtgagggactgcggcagactgtgatc
ggacagcccatgtccgtcaccatcaccaccaaggacaaagatggggagctctgtaagtcc
gggaacgcttacctcactgctgagctgagcacgcctgatggaagtgtagcagatggagaa
atacttgacaataaaaatggcacttacgaatttttgtatactgttcagaaagaaggggat
ttcacattgtcactgagactttatgatcagcacatcaagggcagcccatttaaactgaaa
gtggtcagatcggcagacgtatcccctaccactgagggggttaagagacgtgttaaatct
cctggcagtggtcatgtgaagcagaaagctgtgaaaagacctgcaagcatgtacagcact
ggaaaaagaaaagagaatcccattgaagatgatttgatcttcagagtaggcaccaaagga
agaaacaaaggggaatttacaaatcttcagggtgtagctgcatctacaaatggaaaaata
ttaatagcagacagcaacaaccagtgtgtacagatattttccaatgatggccacttcaaa
agtcgctttggcataagaggaaggtctcctggccagttgcagcgtccaacaggagtagct
gtgcatcctggtggtgacatcattattgcagattatgacaacaaatgggttagcatattc
tcatcagatggaaaatttaaggccaaaattggatctggaaaactcatgggcccaaaaggc
atttctgtggatcgtaatggacacatcattgtagtggataataaagcttgctgtgtgttc
atctttcagccaaatgggaaaatagtcacaaggttcggtagccgagggaacggcgacaag
cagtttgcaggtacacttgatggtcctcattttgcagctgtaaacagcaacaatgaaatt
atcgttacagattttcataaccattctgtcaaggtatttaaccaggagggagaattcata
ctgaagtttggatcaaatggagaaggaaatggacaatttaatgcaccaactggtgttgct
gtagactctaatggaaatattattgtagcagattggggaaacagcagaatacaggttttt
gatggaagcggatcatttttatcctacattaacacctctgctgacccactttacggcccc
caaggtctggcccttacttcagatggccacgttgtagttgcagactctggaaatcactgc
ttcaaggtctatcggtacttacagtaa
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