Tympanuchus pallidicinctus (lesser prairie-chicken): 128084670
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Entry
128084670 CDS
T08967
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128084670 (TFIP11)
Spliceosome [BR:
tpai03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128084670 (TFIP11)
Other components
Complex C specific factors
128084670 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
128084670
NCBI-ProteinID:
XP_052546961
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGEDGVEMESFEVSDWDLQNEFNPHRHRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDVSDEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFTDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSTPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDNPQQLLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMSEILSHEETAI
SNLSKVLDMVEECERRMQPSCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtctcacctgtacggcacggacggggaggatggcgtggagatggagagcttc
gaggtgtcggactgggaccttcagaacgagttcaacccgcaccggcatcggcaccggcag
accaaggaggaggccacttacggcgtgtgggccgagcgagactcggacgaggagcggccc
agcttcggcggcaagcgctctagggattactcagcccccgtgaacttcatcagtgcaggg
ctgaaaaagtcagcagctgaggatgtgtcagatgaggactctgacgaagatgagaagccc
gttaaacaggaggagatccctaaagaatttgtgccaaagaagttgaaaacaggtggaaat
ttcaagcccagtcagaaaggctttgtagggggcacaaaatctttcacggattttggcagc
tgggagagacacactaagggaattgggcaaaaacttctccagaagatgggttatgtccct
ggaagaggtcttgggaagaatgctcaaggtattattaatccaattgaggccaagcaaaga
aaaggcaaaggagctgtgggagcatatggctctgaaagaaccagccagtctttgcaagac
ttccctgttgttgactctgaagaagaagctgaagaggaatttcaaaaagaactcagtcag
tggcggaaggatcctaatggaggcaagaaaaagcccaagtacagctataagacagtagaa
gaactgaaagccaagggtaggattaataaacagctttcaacccctcagaaggagctctct
caagtcaaggttatagatatgacgggccgggagcaaaaggtttattacagctacagtcaa
attagccacaaacacaacatccccgacgacaatcctcagcagctgctgggcaaggactcg
aagccccagggatttgccctgcctgagctggagcacaacttacagcttctcatcgacatc
acggagcaggagatcatccagagcgaccgtcagctgcagtatgagagggacatggtggtc
aacctgagccatgagatacagaagatgtctgagattctctcgcacgaggagacggccatc
agcaacctcagcaaagtcctggacatggtggaggagtgcgagagacggatgcaacccagc
tgtgaaaatcctttgaccttggatgagtgtgccaagatctttgagacgcttcaagacaag
tactatgaagagtacagaatgtctgacagggtagacttggcagtagcaatagtctatcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtacgtacggcactgag
attatagccaagtggaagagccttttggaaaacgaccagctgttatcacacgggggccag
gacctttcaacggatgcttttcacagactgatgtgggaaatctggatgccatatgtcaga
aacatagtggcacagtggcagccaaggaactgtgggtcaatggtggatttcctggatagt
tgggtacacatcattcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctacagaaagaggttgaaaactggaatcctttgacagacacagtcccaatccattcc
tggatccacccctggcttcccctgatgcaggcacgattggagcctctttattctcccatc
agaaacaagctggcgaacgcactgcagaaatggcatcccagtgattcctcagccaaactt
atccttcagccctggaaggatgtgttcacacccgggtcatgggaggctttcatggtgaag
aacattgtgcctaaactcgggatgtgtttgaatgaacttataataaaccctcatcagcag
cacatggatgccttctactgggtgattgactgggagggaatgatttctgtttccagtctt
gttgggctgctggagaaacacttcttccctaaatggctgcaggtgctgtgctcttggctt
agtaatagccccaattacgaggagatcacgaagtggtacttgggctggaagtccatgttc
tcagaccaagtgttggcacatccatcaatcaaagacaaatttaatgaagctcttgatatc
atgaaccgggctgtctcttccagtgttggtggctacatgcagccaggtgcccgggagaac
attgcatacctcactcacacggagaggaggaaagacttccagtacgaagccatgcaggag
cggcgagaggctgagaacatggctcagcgaggcataggagtggctgccagctctgtgcca
atgaattttaaggacctaattcagacaaaagcagaggaacacaacattgttttcatgcct
gtgatcggaaagcggcacgaagggaagcagttgtacacgtttggacggattgtgatttac
attgacagaggtgttgtatttgtacagggagaaaagacctgggtgccaacctctctccag
agtctcattgatatggccaagtga
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