KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128084719
Entry
128084719         CDS       T08967                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpai03019]
    128084719 (ATXN2)
Messenger RNA biogenesis [BR:tpai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128084719 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 128084719
NCBI-ProteinID: XP_052547097
LinkDB
Position
Unknown
AA seq 1117 aa
MSLKQTAAASQPAGNNRKPPGGGGSGGGGGGGLPSASGGGRQNMGRGRSSGKGPPQPTIS
FDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHRKTAESSLG
PKREDILESILFKSSDFVMVHFKDMDTNYARRDAFTDSAISAKVNGEHKEKDLEPWDGGE
TSANEELEALETDVSNGWDPNDMFRYNEENYGVISTYDSSLSSYTVPLERDNSEEFLKRE
ARATQLAEEIESSAQYKARVALENDERTEEEKYTAVQRNANEREGHGVNTRESKYVPPGG
RNRDVLSWGSGRQNSPRMGQSGSGPPISRSGSHTSDFSPNSGADQRVVNGGVPWPSPCPS
PSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSE
GPPRMSPKAQRHPRGHRVSTGRGTISSGLEFVSHNAPGEASTTAVARGSPSGGTWSSVVS
GVPRLSPKTHRPRSPRQSSTPAGPALPSPQPGTIPTESVAMPVPAASPTPASPASNRAVT
PSNEAKDTRLQDQRQNSAAGNKENIKPSETSPSFPKPESKGVSPIVSEHRKQIDDLKKFK
NDFRLQSSSSSDAVDQLLNKTREGEKSRDVVKEKTEPAPKEPIIETGSNTNSNGGSSKPN
SPSISPSISNSSEQKRGPEVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAKE
FNPRSFAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQP
LYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQY
VAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAH
EQTHAMYACPKIPYSKETGPSFYFAISTGSLAQQYAHPNATLHPHPPHPQPSATPTGQQQ
SQHAGSHPAPSPVQHHQHQAAQALHLANPQQQSAIYHAGLAPTPPSMTPGSNTQSPQNSF
PTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQ
AAIAQSALQPIPVSTTTHFPYMTHPSGEECVPGRPAP
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgtccctcaagcagacggcggccgcctcgcagcccgccggcaacaaccgcaaacccccc
ggcggcggtggaagtggaggaggaggaggcggcggcctgccgtcagcatcgggtggcggg
aggcagaacatgggcagaggtcgcagcagtggcaaaggaccgcctcagcccacaatttct
ttcgatggcatctatgcaaacatgagaatggttcacatacttacatcagttgttggatcc
aaatgtgaagtacaggtgaaaaatggtggtatatatgaaggagtttttaaaacctacagt
cctaagtgtgatttagtgcttgatgctgctcatcggaaaactgcagaatccagtttgggg
ccaaaacgtgaagacatactagaaagtattttattcaagtcttcagattttgttatggtg
cattttaaggatatggataccaattacgcaagaagagatgcttttactgattcagccatc
agtgctaaagtaaatggtgagcacaaagaaaaggatcttgagccgtgggatggaggagag
accagcgctaacgaggagcttgaggcactggagacagatgtttccaatggatgggatccc
aatgacatgtttcgttacaatgaagaaaattatggtgtaatatcaacatatgacagcagt
ttatcttcttacacggtgccattagaaagagataattcagaagagtttttgaaacgggaa
gccagagcaactcaattagcagaggaaattgaatcaagtgcccaatacaaagctcgggtt
gccttggaaaatgatgaaagaacagaagaagaaaaatatactgctgttcagagaaatgct
aatgagcgagaaggtcatggcgtgaacactagggaaagtaagtacgttccacctggcggg
agaaacagggatgttctttcttggggaagtggaagacaaaattcaccaaggatgggccag
tctggatcaggcccaccaatttcaaggtctggatcccacacttcagatttcagtcctaac
tctggagcagatcaaagagtagttaacggaggtgttccctggccatcgccttgcccatct
ccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggca
gccacccctacacggccgccctccaggcccccctcgcggccctccaggcccccgtctcac
ccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaa
gggcctccacggatgtctcctaaggcacaacggcaccctcgaggtcacagagtctctact
ggtaggggtacaatttcaagtggcttagaatttgtatctcataatgcaccaggggaagca
tctactactgcagtggcacgaggcagcccttcaggtgggacgtggtcatcagttgtcagt
ggggttccaagattatcccctaaaacacacaggcctaggtccccaaggcagagcagcact
cctgcaggaccagctctgccttctcctcagcctggtactattcccactgaatctgttgcc
atgcctgttccagctgcctctccgacacctgccagtcctgcatccaacagagcagttacc
ccttccaatgaagctaaagataccaggcttcaggaccagaggcaaaattctgcagctgga
aacaaggagaatataaagccaagtgagacttctcctagttttcctaaacctgaaagcaaa
ggtgtatctccaattgtttctgaacatagaaaacagattgatgatttaaagaaatttaag
aatgactttaggttacagtcaagttcctcttcagatgcagtggatcagctgctaaacaaa
acccgagaaggtgaaaaatcaagagatgtagttaaagaaaagacagaaccagcccctaaa
gaacctatcatagaaactggcagtaatactaactctaatggtggtagtagcaaacccaat
agtcctagtatttctccatcaataagtaatagttctgagcaaaagcgagggccggaggta
acttcacaaggtgtacagacatctggtccaggaagcaaacaagataaagaggataaagag
gagaagaaggatacttctgagcaagttagaaaatcaacactgaatcctaatgcaaaagaa
ttcaaccctcgatcttttgctcagccgaagccttctactacaccaacctcccctcgccca
caagctcaaccaagcccttccatggtgggccatcagcagccaactccagtgtacactcag
cctgtttgttttgcaccaaatatgatgtacccggttccagtgagtccaggcgtgcagcct
ttgtatcctatacccatgacgcccatgccagtgaaccaagccaagacatatagagcaggt
aaagtaccaaatatgccacagcagcggcaagaccaacatcatcagagcaccatgatgcac
cctgcctcagcagcaggccctccaattgtagctacaccgcctgcttattcaacacagtat
gttgcatatagtccccagcagtttcctaatcagcctcttgtgcagcatgtgccacactac
cagtcgcagcatcctcatgtttatagccctgtaatacagggcaacgctagaatgatggca
ccaccaactcatgcacagcctggtttagtatcttcttctgcaacacagtatggtgcgcat
gaacagacgcatgctatgtatgcatgtcccaaaataccatacagcaaggagacaggccct
tctttctactttgccatttccactggctcacttgctcagcagtatgcccaccctaatgct
accctgcatccgcaccctccgcatcctcagccttcggctacgccaactggccagcagcaa
agccaacatgctggaagccaccctgctcctagccccgtgcagcatcatcagcaccaggct
gctcaggcactccacctggcaaacccacaacagcagtcggcaatttaccacgcaggtcta
gctccaaccccaccttccatgacgccaggctccaatacgcagtctccacaaaatagtttt
cctacagcacaacaaacagtcttcaccattcatccctcccatgttcaacctgcatatacc
aatccgccacacatggcccatgtcccccaggctcatgtacagtcaggaatggttccttct
cacccaactgcccatgctccaatgatgctaatgacgacacagccacctggtggtccccaa
gccgccatcgctcaaagtgcactacagcccattccagtctcgacaacaacacatttcccc
tatatgacgcacccttcaggtgaggagtgtgtgcccgggagacctgcaccgtaa

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