Tympanuchus pallidicinctus (lesser prairie-chicken): 128084799
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Entry
128084799 CDS
T08967
Symbol
ABCB9
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
tpai04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128084799 (ABCB9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128084799 (ABCB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128084799 (ABCB9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128084799 (ABCB9)
Membrane trafficking [BR:
tpai04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
128084799 (ABCB9)
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
128084799 (ABCB9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
nSTAND1
AAA_29
AAA_21
DUF2448
ABC_ATPase
DUF4191
Motif
Other DBs
NCBI-GeneID:
128084799
NCBI-ProteinID:
XP_052547318
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MKEQTAVFEIRTVGGCCGLPNGTCNPINSSWLITTPLLPLALCTGCGHVLTALGLSPPTS
RMRAWKAVASTLALSGADVVVTTLLYAHGRRGRDILQDLRHFNIFNSLLDIWGGCLYRSC
VLLGAAIGVATNTAYGPRRLRASRTFIAVVCLLMGIYMMVKLLLYSEVRRTIRDPWFWGL
FAWTYVALVATFGLWQLLACVTSSREALGHGSESRTEAEESCDAPRDKREEAAGPTIHKL
LSYTKPDAIFLGIASFFLLVAALGETFLPYYTGLAIDGIVVQKSMDRFSTAVLVMSLLAI
GSSFAAGVRGGVFTLIFARLNIRLRNCLFRSLVSQEMSFFDENRTGDVISRLTSDTTIVS
DLVSQNINIFLRNMVKATGVIFFMFSLSWKLSLVTFMGFPIIMLVSDIYGKYYKKLSKDV
QNALAKANNTAEETISAMKTVRSFANEEAEANVYWQKLQQVYRLNKREALAYTYYVWSSG
LTLLVVQVSILYYGGHLVISGQMTSGNLISFIIYEFVLGDCMESVGSVYSGLMQGVGAAE
KVFEFIDRKPTMVNDGSLAPDHVDGKVEFRNVTFSYRTRSATQVLQNVSFTLHPGKVTAL
VGPSGSGKSSCVNILENFYPLQDGQVLLDGRPINMYDHKYLHSVISLVSQEPVLFARSIA
DNISYGLASASFESVVQAAQKANAHAFITELQDGYHTEAGEKGAQLSGGQKQRVAIARAL
IRTPPILILDEATSALDAESEHAIQQAIYGDLQNHTVLVIAHRLSTVEKAHNIIVLDKGR
VVQQGSHKELMEEGGLYSKLVQRQILGLEAGSADSRQPTARGDSAKAPGGLEGEFRIDHS
LPAAAQDDCNNTTPK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacagacagcggtgtttgagatcaggacagtgggtggctgttgtggccttccc
aatggcacttgcaaccccattaactcctcatggctaataacaactccgctccttcctctc
gccctgtgcacaggctgtggccatgtcctcactgcgctaggcctgtccccccccacctcg
aggatgcgtgcctggaaggcggtggccagcacgctggcgctgagcggagccgatgtggtg
gtcaccacgctgctctatgcccacggccggcgtggtcgggacatccttcaggacctgagg
cacttcaacatcttcaactcgctgctggacatctgggggggctgtctgtaccgtagctgt
gtgctgctgggggccgccatcggagtggccaccaacacggcctatggcccccggcgcctc
agggcttcgcggaccttcattgctgtcgtctgcctcctcatgggcatctacatgatggtg
aagctgctgctctactctgaggtgcggaggaccatcagggacccctggttctgggggctc
tttgcttggacctatgtggcgttagtggccacctttgggctgtggcagctgctggcctgt
gtcacatcttcccgtgaggcgctgggtcatggctctgagtcccgcaccgaggcggaggag
agttgcgacgccccacgggacaagcgagaggaggcagcgggacccaccatccataaactg
ctgtcctacaccaagccagatgccatcttcctgggtattgcttccttcttcctcctcgtg
gccgcgctgggagagaccttcctgccctactacacagggttggccattgacggcattgtg
gtgcagaagagcatggaccgcttctccacggcggtgctggtcatgtcgctgctcgccata
ggaagctcatttgccgcaggtgtccggggcggcgtttttacgctcatatttgcgagactg
aacatccgccttcgcaactgcctcttcaggtcgctggtgtctcaagagatgagtttcttt
gatgagaatcgcacaggggatgtcatctcccgcctgacgtcggacacaaccatcgtgagt
gacctggtctcccagaacatcaacatcttcctgcgcaacatggtgaaggccacaggggtg
atcttcttcatgttcagcctctcatggaagctctcgcttgtcaccttcatgggcttcccc
atcatcatgctggtgtctgacatctacgggaagtactacaagaagctctccaaggatgtg
cagaacgccctggccaaggccaacaacactgctgaggagaccatctctgccatgaagact
gtccgcagctttgccaatgaggaggcagaggcaaatgtgtactggcagaagctgcagcaa
gtgtacagactcaacaagcgggaggccctggcgtacacctactatgtgtggtccagtggg
ctcaccctcctggtggtccaggtcagcatcctgtactatggagggcaccttgtgatctct
gggcaaatgacgagtggaaacctgatatccttcatcatttatgagtttgtcttaggagat
tgcatggagtctgtgggctctgtctacagcggcctgatgcagggggtgggcgcagccgag
aaggtgtttgagttcattgaccgcaagccaacaatggtcaacgatgggtcactggcccca
gaccatgtggatggaaaggtggagttcagaaatgtgacattctcttaccgcactcgttcc
gcaacgcaggtcctccagaacgtgtccttcaccctgcaccctggcaaagtgacagcactg
gtgggcccctcagggagtgggaagagctcctgcgtcaacatcctggagaacttctaccct
ctgcaagatgggcaggtgctgctggatgggcgtcccattaacatgtacgatcacaagtac
ctgcactcagtgatctccctggtcagtcaagagccagtgctgtttgctcgctctattgct
gataatatttcttatggcttagcttcagcctcctttgagtcggttgttcaggctgcccag
aaagctaacgcacacgccttcatcacggagctgcaggatggctaccacacagaggcaggt
gaaaaaggagctcagctatcaggtggccagaagcagagagtggctattgccagagccttg
atccgaacccctcccatcctaatcctggatgaagccacaagtgcactggatgcagagagt
gaacatgcgattcagcaggcgatttacggtgacttgcagaaccacacagtgcttgtcata
gcacacaggctgagcactgtcgagaaggcacacaacatcattgtgctggacaagggccgc
gtggtgcagcagggctcacacaaggagctcatggaagaaggaggtctttattccaagctg
gtgcagagacagatcctggggctcgaggcgggtagcgcagacagccgccaacccacagcc
cggggggattcagcgaaggcgcccggcgggctggagggagagttcaggatagaccattcc
ctcccagctgcagcacaggacgactgcaacaacacaactcctaagtga
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