Tympanuchus pallidicinctus (lesser prairie-chicken): 128084836
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Entry
128084836 CDS
T08967
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04120
Ubiquitin mediated proteolysis
tpai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128084836 (UBE4B)
04120 Ubiquitin mediated proteolysis
128084836 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128084836 (UBE4B)
Enzymes [BR:
tpai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128084836 (UBE4B)
Ubiquitin system [BR:
tpai04121
]
Ubiquitin ligases (E3)
U-box type E3
128084836 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
128084836
NCBI-ProteinID:
XP_052547401
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPSTPLTSPQRETPPGPPAAAPTPGPSHSLGLSVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIF
LNSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAATARSP
DRSLILNTGSNPGTSPMFCNVGSFGSSSLSSLYGTSPAPTTNFTSYVPMTGSSLTPPASS
VATTSVPSITVSSHLTTTSPSWTQPSSARYRPYTVAHSGGFSASSTPRSLNISIPASSSP
PVMAASPPAVLLTAPRQRPSTMGPPLFTASPSTLRRRSSLLNRIPSSIYDNPFSLLFLGV
SDVSEDSSDEENEDDDFSCVQFGSSVGGSGSSSVCDSCSDHFTIENCKETEMLNYLIECF
DRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLC
RNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAIASKECSLDSDNFKYPLMALCELCEI
KFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSG
PAITLENTRVVSQSLQHYLELARQELFKILHSILLNGETREAALSYMAAVVNANMKKAQM
QTDDRLVSTDGFMLNFLWVLQQLSMKIKLETVDPMYIFHPRCRIDLPTDETRVKATMEDV
TAWIAELYRDPSPFSDPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLK
NNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLM
LRILDPAYPNIKLPLTLEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMF
LVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEI
VAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQT
LTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagatccgtcgaaggcgccttgcccggctggcaggggga
ccatcgtcccagcccagcacaccgctcacatcgccgcagagagagaccccacctgggcct
cctgcagcagctccgaccccggggccgtcccacagcctcggcctcagcgtccacagcatg
accccagctacctcgcccataggtgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatcaaacagccttgaaacacaatctcagtctctc
tctcggtctcagagtatggatattgatagtgtctcctgtgaaaaaagtatgtcccaggta
gatgtggattcaggaattgagaacatggaagtggatgagaatgatcgcagggagaaaaga
agtctgactgataaggaggaacctctgtctgggtctgaggtatccgaggagcaagcttta
cagctggtctgtaaaatcttcagagtctcttggaaggaccgagacagagatgttatcttc
ctgaattctctctctgctcagtttaagcagaacccaaaagaagtgttttcggattttaag
gacttgatcggacagatcctgatggaagtgctgatgatgtctacccagtcaagggatgaa
aacccgtttgccagtctgacagctacatcacagccaattgctgcaactgcccggtctcct
gacagaagcctgattttaaacacgggctccaacccaggaaccagccctatgttctgtaat
gtgggctcctttggttccagttcattatccagtctctatgggactagtccagctcctact
accaatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttca
gttgccaccacatctgtgccttccattactgtcagctctcacctcacaacaaccagccct
tcttggacccagccttcctctgcgaggtaccggccatatactgttgcccattctggaggc
ttttcagcttcttctaccccgcgttccttgaatatttccatcccagctagttcaagtcct
ccagtcatggctgctagccctccagccgtgctgctcactgcacccagacagagacccagc
accatgggtccgcctttgtttactgcttcacccagtaccttgcgcaggcgttcatcttta
ctgaacaggattccttctagtatatacgacaaccctttctccctcctcttccttggcgtt
tctgatgtgtctgaggacagtagtgacgaagaaaatgaagatgatgatttttcttgtgtc
cagtttgggtccagtgtgggaggctctggcagctcaagtgtttgcgattcctgcagtgac
cacttcaccattgaaaactgtaaggagacagagatgctgaactacctcatcgagtgtttt
gaccgggttggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagtgagt
cagttactgagcaacatacgatcgcagtgcatttcgcatgctgctttggtgctccaggga
tccttaacgcaaccaaggtcactgcagcagcagtctttgctggtaccatatatgctgtgt
aggaatctcccatttggcttcatccaagaactggtgagaacaacttaccaagatgaagag
gtgttcaaacagatctttatcccaatcctgcaaggcctggctatagcttccaaagagtgc
tcccttgatagtgacaattttaagtacccccttatggcattatgtgaactttgtgaaatc
aagtttggaaaaacacaccccatgtgcagtttggttgtctctttgcccttgtggctgcct
aaatctttaagcacaggtgcaggaagagagctacagagactttcctatcttggagccttc
ttcagtctctctgtctttgcagaagatgacaacaaagttgttgagaagtacttctcagga
cctgccatcactcttgaaaacacccgagttgttagccagtccttgcagcattacctggaa
ctggcgaggcaagagctgttcaagattctgcatagtattttactgaatggtgaaactcga
gaggcagctctcagttacatggcagctgttgtcaacgccaacatgaaaaaggcacaaatg
cagacagatgatcgtttggtgtctacagatggttttatgctcaacttcctatgggtactg
cagcaactaagtatgaagatcaagctggaaacggttgatcccatgtacatatttcatccc
aggtgtcgtattgacctcccaacagatgagacaagagtgaaagcaacaatggaggatgtt
acagcctggattgctgagctttacagggatccgtctccgttttccgatccgaaattccca
actgaatgtttcttcttaaccctgcatgcccatcatctctccatcctgccaagctgccgt
cggtacatacgcagactgcgagccatcagggaactcaacaggactgttgaagatctgaaa
aacaatgaaagtcaatggaaggattctcctctggctaccagacacagagagatgctaaaa
cgttgcaagacgcagcttaagaaactggtgaggtgcaaggcttgtgcagatgctggtttg
ctggatgagaactttctcaggagatgtctgaatttctatggcatggtgatccagctgatg
cttcgcatcctcgaccccgcctatcccaacataaaactgcctttaacgcttgaagttccg
aaggtatttgcagcattgccagagttttacgtggaagatgttgctgaatttttatttttt
attgtacaatatgctcctcaggtgctttatgagccctgtactcaggacatagtgatgttc
cttgttgtgatgctgtgcaaccagaactacatccgaaatccttatttagtagccaagctg
gtggaggtgatgttcatgaccaatccagctgttcagccccgaacacagaagttctttgaa
atgattgagaatcatcctctctccactaaattgttagttccctccttaatgaaattttac
acagatgttgagcatactggagcaactagtgaattctatgacaagtttacgatccgctac
cacatcagcaccattttcaaaagcctttggcagaatatagctcaccatggtacattcatg
gaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaatgacaca
actttcttgctggatgagagtctggaatccctaaaacgtatccatgaagtgcaagaggag
atgaagaataaagaacaatgggacctgctgcccagggatcagcagcaggctcggcagtcg
cagctggctcaggatgagcgtgtctctcgttcatatcttgccctggccacagaaactgtt
gatatgttccatatccttaccaagcaggttcaaaagccttttctcagacctgaacttgga
ccacgattggctgctatgttgaactttaacttgcagcaactctgcggcccgaagtgccgt
gacctaaaagttgaaaaccctgagaaatatgggtttgaaccaaagaagctgttggaccag
ctgactgatatttatctacagctagattgtgctcgttttgctaaagcaattgctgatgat
cagaggtcctacagcaaagagctctttgaggaggtcatatcaaagatgagaaaggctgga
atcaaatcaaccatagcaatagaaaaattcaaacttctggcagagaaagtggaggagatt
gttgccaagaatgcccgtgcagaaattgattacagcgatgctccggatgaattcagagat
ccgctcatggacactctgatgactgatcccgtgaggttgccatctggaaccattatggac
aggtcaatcatcctgaggcatctgctgaattcttccactgatcccttcaatcgtcagacg
ctgacagaaaatatgctggaaccagtgccagaactcaaagagcaaatccaagcctggatg
agagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
