Tympanuchus pallidicinctus (lesser prairie-chicken): 128085163
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Entry
128085163 CDS
T08967
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpai03032
]
128085163 (TOP2B)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128085163 (TOP2B)
Enzymes [BR:
tpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
128085163 (TOP2B)
DNA replication proteins [BR:
tpai03032
]
Eukaryotic type
DNA Topoisomerases
128085163 (TOP2B)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
128085163 (TOP2B)
Centrosome formation proteins
Centriole proteins
128085163 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DTHCT
DNA_gyraseB
HATPase_c
Toprim
DUF7180
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
128085163
NCBI-ProteinID:
XP_052548173
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MAKSGGGGGGGGGGSGGLTWVTLFDNQINASKKEESESVNKNDTSKKMSVERVYQKKTQL
EHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDK
NMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTG
GRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEPKIKHFEGDDYTCITFQ
PDLSKFKMEKLDKDIVSLMTRRAYDLAGSCKGVKVMLNGKKLPVNGFRSYVDLYVKDKLD
ETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEV
VKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQPKSFGSKCQLSEKFFK
AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSLDCTLILT
EGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKK
SYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKA
SKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRY
AGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFIN
KELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHG
EQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPS
VDDNLLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRML
DGLDPHPMLPNYKNFKGTIQELGQNQYVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVL
EPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSM
VLFDHMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQ
GKITIENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNPNDDASSASGSTSGP
DFNYILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSASDLWKEDLAAFVEELEKVEA
QEREDVLAGMVGKPIKGKVGKPKMKKLQLEETMPSPFGRRIVPQITSAMKADASRKLLKR
KKGDADSVAIKMEFDEEFGGVQAEGGGDDSVNTAASATKIPKLKREKKEPGTRVRRAPSS
TKSSAKKVKKRNPWSDDESKSESDLEESEPVIIPRDSLLRRAAAERPKYTFDFSEEEDDA
DDDDDANNNNDLDELKVKASPVINDREDEFVPSDSLEKDEYDFSPVKSKPSPDRKMSQEK
KNQDFGNIFSFPSYSQKTDDDTTKLDSDEEDSTPVFSSPFAPKQTEKILSKTVAAKKAKV
DVPPKPKRAPKAKKMETVNSDSDSEFGIPKKTAAPKGKGRGAKKRKASSSENEGEYNPGK
KTPKSTPCKKSKKATFDQDSDVEIFQSGFASETAPKPRTGRARKEVKYFAESDEDDDFDM
FN
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtccggaggaggaggaggaggcggcggcggtggcagcgggggactgacctgg
gtgacattatttgataatcaaatcaatgcttcaaaaaaggaagaatcagaaagtgttaat
aaaaatgacacttcaaagaagatgtctgttgagagagtttatcagaaaaagactcagctt
gaacatatcctcctccgtccagacacctacattggatcagttgaacctttaactcagtta
atgtgggtttatgatgaagatgtcggaatgaattgcagagaggttacctttgtccctggc
ttatacaagatctttgatgaaatccttgtaaatgccgctgacaataagcagagggacaag
aatatgacctgtattaaaatatccattgatccggaatcaaacattatcagcatatggaat
aacgggaagggtataccagttgtggaacacaaagtagaaaaagtttatgttcctgcttta
atctttgggcagctgttaacatctagcaactacgatgatgatgagaaaaaagttacaggt
ggtcgtaatggctatggcgcaaaactttgtaacatatttagtacaaagtttacagttgaa
actgcttgcaaggaatacaaacacagcttcaagcagacttggatgaacaatatgatgaag
acttctgaacccaagattaagcattttgaaggtgacgactacacatgcattacattccaa
ccagatctatctaaatttaaaatggaaaaacttgacaaggatattgtgtccctcatgaca
agaagagcatatgatttggctgggtcatgcaaaggagtcaaagttatgttgaatgggaag
aagttacctgtaaatggatttcgcagttacgtagatctttacgtaaaggacaagctggat
gaaactggagttgcactcaaagttattcatgaagtcgtgaatgaacgatgggatgtgtgc
ctaactttaagtgagaaaggatttcagcaaatcagctttgtaaatagtatagctactaca
aagggtggtaggcatgttgattacgtggtggatcaggttgtgggcaaactgatagaagtg
gtaaaaaagaagaataaagctggagtttcagtgaaaccatttcaggtgaagaatcatata
tgggtttttgttaattgcttgattgaaaacccatcttttgattcccagacaaaggaaaac
atgacattgcagcctaagagttttgggtccaagtgccagctatctgagaaattttttaaa
gcagcctctaactgtggtatcatagagagtattttgaattgggtcaaatttaaggcacag
actcagctgaacaaaaaatgctcatctgtgaaacacagtaaaatcaaaggcattccaaaa
ctggatgatgctaatgatgcaggtggcaaacattccttggactgcacactaatattaaca
gaaggagactctgccaaatctttagctgtctctggcttaggtgttattggtcgggacaga
tacggagtattcccactcaggggtaaaattctcaatgttcgagaagcttctcacaagcag
atcatggaaaatgcagaaatcaacaacatcatcaaaattgttggactgcaatacaagaaa
agctatgaagatccagaatctctaaaaagtctgagatatggaaaaattatgataatgaca
gatcaggatcaggatggatctcacataaaaggcttgttgatcaattttattcatcacaat
tggccctcactgttgaaacatggttttcttgaggaattcatcactcctattgtaaaggca
agcaaaaataagcaagaactttcattctatagtattcctgagtttgacgagtggaagaaa
cacatggaaaatcataaagcatggaagataaaatattacaaaggtttgggtaccagcact
gctaaagaagcaaaagagtattttgctgacatggaaagacatcgaattttatttcgatat
gctggtcctgaagatgatgctgccattacactggccttcagtaaaaagaaaatcgatgat
cgaaaagaatggttgacaaacttcatggaggacaggcgacagcgtcggctacatggcctt
cctgagcaatttttatatggtacagcgacaaaacatttgacctacaatgacttcattaac
aaggagttgatcctcttctcaaattcagacaacgaaagatctattccctcccttgttgat
ggtttaaaaccagggcagcgcaaagttttgttcacttgctttaagagaaatgataaacgt
gaagtaaaggttgctcagctggctggttctgttgctgagatgtcagcttatcaccatgga
gagcaagcactaatgatgaccattgtcaacttggctcagaacttcgttggaagtaacaat
gttaatcttctacaacctattggtcagtttggtaccaggcttcatggtggaaaggatgct
gccagccctcgctatattttcactatgctaagccctttagccaggcttctttttccatca
gtggatgacaacttgctgaaattcctttatgatgacaaccaacgtgtagagcctgaatgg
tatatccccatcattccgatggttttagtaaatggagctgaaggaattggtactggatgg
gcttgcaaacttccaaactacgataccagagagattgtaaacaacgtcagacgaatgctg
gatggtttagatccccatcctatgctcccgaactacaaaaacttcaagggaaccattcaa
gaacttggtcaaaaccagtatgtagtcagtggtgaaatatttgtggtggacaggaacact
gtagaaattacagagctacctgtaaggacatggacccaggtgtacaaagaacaggttcta
gaacccatgttgaatggaacagaaaaaactccagcattaatctctgactacaaggaatac
cacacagatacaactgtgaaatttgttgtgaagatgacagaagaaaagcttgcacaggca
gaagctgctggattgcacaaagtctttaagcttcaaacaagtcttacttgtaattctatg
gtgctatttgatcatatgggatgtttaaagaagtatgaaactgtgcaagacattttgaag
gagttctttgacttgcgattacattattatagtttacgtaaggaatggcttgtgggaatg
ttgggtgctgaatctacaaagctaaacaaccaagctcgcttcattctggagaagatacaa
ggaaaaattaccatagagaatagatcaaaaagagatttgattcaaatgttggttcagagg
ggctatgaatccgatccagttaaagcttggaaagaagcacaggaaaaggcagcagaagag
gaggacccacaaaacccaaatgatgatgcttcctctgcttctggatcaacttctggccct
gattttaactatatcttaaacatgtctctgtggtcacttacaaaagagaaagtggaagag
ctaattaagcacagagattcaaaggagagagaactaaatgaccttaaaaggaaatctgct
tcagatctctggaaagaagacttagcagcttttgttgaagagcttgaaaaagtggaagca
caggaaagagaagatgtcctggctggtatggttggcaaaccaataaaaggtaaagtcggt
aaacccaagatgaagaaacttcagttggaagagaccatgccatcaccatttggtagaaga
atagttccacagattacatctgccatgaaagctgatgccagtaggaaattgctgaaaagg
aaaaagggtgatgctgattctgtagcaataaaaatggaatttgatgaagaatttggtggc
gtgcaagctgagggtggtggggatgactcagtgaatacagcagcctcggcaactaaaatc
cctaaactgaagagagagaagaaggagcctggtactagagtaagaagagcaccatcatct
acaaaatccagtgcaaaaaaagtgaagaaacgaaacccctggtcagatgatgagtccaag
tctgaaagtgatttagaagagagtgagcctgtgattattccaagagactctctgcttagg
agagctgcagctgagaggcctaagtatacatttgacttctcagaagaagaagatgatgct
gatgatgacgacgatgccaacaataataatgatttagatgagcttaaagtaaaagcctct
ccagttataaacgacagagaggatgagtttgttccctcagacagtttagaaaaagatgaa
tatgacttctctccagtcaaatcaaagccatctccagatagaaaaatgtctcaagagaag
aaaaatcaagactttgggaacattttctcattcccatcttactctcagaagacagacgat
gatacaacaaaattggacagtgatgaggaggattctactcctgttttctcatcacctttc
gccccaaaacaaacagagaaaattctaagtaaaacagtagctgctaaaaaagcaaaagta
gacgtaccacctaaaccgaagagggctcccaaggccaagaagatggaaactgtaaattct
gactcggattcagaatttggcattccaaagaagactgcagcacccaaaggaaaagggaga
ggggcaaagaaaaggaaagcatcaagctcagaaaatgaaggtgaatacaaccctgggaag
aagacacctaaatcaacaccatgcaagaaatccaagaaggccacttttgaccaggattcg
gatgtggaaatcttccagtcaggctttgcctccgaaactgccccaaagccccggacaggc
cgggctaggaaagaagtgaaatattttgcagagtctgatgaagatgatgattttgatatg
tttaattaa
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integrated database retrieval system
