Tympanuchus pallidicinctus (lesser prairie-chicken): 128085358
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Entry
128085358 CDS
T08967
Symbol
SYNE3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128085358 (SYNE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128085358 (SYNE3)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
128085358 (SYNE3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
Spectrin_SYNE1
TM-like_Thioredoxin-like_C
Prominin
Motif
Other DBs
NCBI-GeneID:
128085358
NCBI-ProteinID:
XP_052548513
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MLSPNTKETVEGLRVSLNAMTQQLQDEFDSSVENAEAWMKAIQERLSINDNTKGPRSALE
ARLRETEKIRDLEPEGTLKMDLILAKADAALHCISEDKKHEVLSKLRHIKALWEETAIYI
THCHSRIEWVWLHWSEYLKAQDEFYIWIHNMRVTLEPDIELQLGLKEKQWQLSHAQVLLN
DVLNQSVLLETLLEEASSLFNRIGDPSVDEDAQKKMKAEYESIREEAQSRVKLLEKITEE
HKKYSTNINQFQSWLNGVTERLNCCIGETTKSSVEDRLMALKEIAKNIRSGAKKLKHLEN
QCADVIQNTCPLGAERLKDELYELRKALEKLKLLSNEEEQRLLKIQQSESAYKSQARQLE
ADIQEFRKGLQKLENDLDPGEREKTEDEFVAQWRKCNATRAVLAAEESKVERLKAQLKEL
LRFSQDVQPHADSVISAIREYQSVKGKTSKMSTDTETQLSRLFQNPLQSFEQWKLTVQML
LETPEPALDQIEAALAESSQFKEKLMTLQLKKDLLNNILGEEKAKSFLEEVAEASKEREI
LHKSLLQRKSKLQNLILQHKDFDAAFAPLQKKLFAIKSKLDLENEPQPNLLGKKTQLQRF
QMIQDDLAELAIQMEEVEKLVQSNATHRHEMNQLLSDIQALKRSLEIMIQQSEEHVQKHW
AFNDKLSDLQQWITATTEKIGSYQGVDVKQSNESRVADLERWLAEFPDKEIQLHLVEAHG
QLVMENSSPEETAHVQAELDQLKESWRSLKEMATGLLKRWQLNIPMADKKKIAFEDSRHI
SGPVFHCLDLNHKQEKTAEGQRTSNHIKLLLDFEEWLQGENTKLSKILAVNLSSIEEIKT
RHKELEELQARVPDGQRRFEDLLRFHPVIGNSEDLEDLRYRWMLYKSKLKESTISPITGS
SEKPDRFRKRRSGGMCSFLHRVCWASLPLQLLLLFLLLLAFLLPLAEKTHSCTLANNFAR
SFNLMLRYEGPPPT
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcctaacacaaaagaaacagtagaaggtctgagggtttctttgaatgcaatg
actcagcagctacaggatgaatttgacagcagcgtggagaatgcagaagcttggatgaag
gccatccaagagagactgagcatcaatgacaacaccaagggaccacgatctgccctagaa
gccaggctgagagagacagagaaaatacgtgatctggaaccagaaggcaccttgaaaatg
gacttgatcctcgcaaaggcagatgctgctcttcactgtatcagtgaggataagaaacac
gaagtactgtctaagctgagacacattaaagccttgtgggaagagacagccatttacatt
actcactgtcacagccgtattgagtgggtctggctgcactggagtgagtacctgaaagct
caagatgagttttacatatggattcacaacatgagggtgaccttggagcctgacattgag
ttgcagcttggcttaaaggagaagcagtggcagctgagccacgctcaggttctgttgaat
gatgtcttaaatcagtcggtccttctggaaacactgctagaggaggcttcttccttgttc
aacaggataggtgaccccagcgttgatgaggacgctcagaagaaaatgaaggcagaatat
gaaagcatcagggaagaagcccagagcagagtgaaattgcttgaaaagataactgaagag
cacaagaaatacagcactaacatcaaccagtttcaatcgtggctgaatggtgtgacggaa
agattaaactgctgcattggagaaacaaccaagtcttcagtggaggacagactaatggca
ctgaaggaaattgccaagaatattaggagcggtgcaaagaaattgaagcaccttgaaaat
cagtgtgcagatgtgattcaaaatacctgcccactgggagctgagagattgaaggatgaa
ctctatgagctgagaaaagccttggagaagttgaaactgctgagcaatgaggaggaacag
agattgctcaagattcagcagtcagaaagtgcctacaagtcccaagccagacaattagaa
gcagatatccaggaattcagaaaaggtctacagaaactagaaaatgatttggaccctgga
gaaagggaaaagactgaagatgagtttgtagctcagtggagaaaatgcaatgcaacaaga
gcagttctggctgcagaagagtcaaaggttgagaggctgaaggctcagctaaaggaactg
ctgcggttttcccaggatgtgcagccacacgctgacagcgtcatctctgcaatacgggaa
tatcaaagtgttaaaggaaagacatctaaaatgagcactgatacagaaactcaactgagc
agacttttccaaaatcccctgcaaagttttgaacaatggaagctaactgtccagatgctc
ctggagactccagagccagcgttggatcagattgaggctgctctagctgaaagttcacag
ttcaaagagaagctgatgacattacagctgaagaaagatttgctgaacaatatccttgga
gaggaaaaagcaaaatccttcctggaggaagtagctgaagcttcaaaggagagagaaatt
ctacacaaaagtctactgcaaagaaaaagcaaactccagaatttgatactgcagcataag
gattttgatgctgcttttgcacctttgcagaagaaattgtttgccatcaaatccaaatta
gacttggagaatgaaccacagcctaaccttttgggtaaaaagacacaactccagagattc
cagatgatccaagatgacttggcagagcttgcaattcaaatggaagaggtagagaagctt
gttcagtcaaatgcaacacatagacatgaaatgaaccaacttctgtctgacattcaggcc
ctgaagagatcactggagattatgatacagcagtctgaagagcatgttcagaagcactgg
gcatttaatgacaaactgtctgacctccagcagtggatcactgcaaccactgagaagatt
ggctcctaccagggtgttgatgtgaagcagagcaatgagagcagggtggcagaccttgag
agatggctagctgagtttccagataaggagatccagctgcaccttgtggaagctcatggc
cagctggtcatggagaattcttccccagaggagactgcccatgttcaggcagagctggat
cagctgaaggagtcttggagatcactgaaagaaatggcaactggtcttctcaaaaggtgg
cagttaaacataccaatggctgataagaagaaaatagcatttgaagatagcagacacatt
tctggaccagtcttccattgtttagatctcaaccataagcaggagaagacagcagaaggg
caaaggacaagcaaccacattaagctcctgcttgactttgaagagtggttacaaggagaa
aacaccaaactctccaaaattcttgctgtgaatttgtcttccatagaggaaatcaagaca
cgccacaaagaattggaggagctgcaggctcgtgtgcctgatggtcagcgtcgctttgaa
gaccttcttcgttttcatcctgtcattggaaattctgaagatctggaagacctgcgttac
cgctggatgctttacaaatctaaactgaaagaatccacgatttcaccgattactggatct
tcagaaaaaccagacagatttagaaagaggcgctctggaggcatgtgctccttcttgcat
cgagtatgctgggcatcgctaccgttgcaactgctcctcttgttcctcctgctcctggcc
ttcctcctgcccctggcagagaagacgcacagctgcacactggccaacaactttgcccgg
tccttcaacctgatgctgagatacgagggcccacctccaacctaa
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