Tympanuchus pallidicinctus (lesser prairie-chicken): 128085413
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Entry
128085413 CDS
T08967
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128085413 (HMBOX1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128085413 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
HTH_26
HTH_TSHZ3
CUT
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
128085413
NCBI-ProteinID:
XP_052548672
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MLRTFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQEHSDK
FGRRSSYGGGSYSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMR
PAPIPIEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQASYTIHATRN
DDSTSHSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaacttttccagtagtcctgctggaaaccatgtctcactacacagacgaacca
agatttaccatagagcagatagacttgcttcagcgcctgagacgtacaggaatgaccaga
catgaaatcctccatgcgctggaaaccttggatcgtcttgatcaagagcatagtgacaaa
tttggaagaagatctagctacggaggtggttcctacagcaacagcaccaacaacgtccca
gcatcttcctcgacagccacggcttcaacacagacccagcattctgggatgtccccatcc
ccaagcaacagttatgacacctccccacagccttgcactactaatcagaacgggagggag
agtaacgagaggttgtctgcattcaatgggaagatgtcacccacccgttacccgctagca
aacagcttggctcaaaggtcctacagttttgaagcttccgaagaagacttggacatcgat
gacaaagtggaggaactgatgaggagggacagcagtgtgataaaggaggaaatcaaagcc
ttcctagccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcag
agccggatctcacattggcttttgcaacaggggtcagacttgagtgaacaaaagaaaagg
gcattttacagatggtaccagcttgagaagacaaatcctggggctacgttaagcatgcga
ccagctcccatcccaatagaagagccagaatggagacagacacctcccccagtcacagct
acctctgggaccttcagactacggcgaggcagtcggttcacatggagaaaggaatgcctg
gctgttatggaaagttacttcaatgagaatcaatatcctgacgaggcaaagagagaagaa
attgccaacgcctgtaatgcagttatacaaaagccaggaaaaaaattatcagatctggag
cgagttacctcccttaaagtgtacaactggtttgccaacagaagaaaggaaatcaagaga
cgagccaatatcgaagcagcaatcctggagagccatggaatagatgtacagagtccggga
ggtcattccaacagcgacgacgttgatggcaatgactactcagagcaggacacttggcaa
gtacgcaatggggaggaggagggaagatgttcagagggaggcagagaagcagagaaggta
gaagaagacaggaggatctgctccaaacaagcaagttacaccattcacgccacacgcaat
gatgacagcactagccatagtgaccatcaagaccccatttcattagctgtggaaatggca
gcggtaaaccacaccatcttggcattggcccggcaaggagccaacgagatcaagacagag
gctctagacgacgactga
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