Tympanuchus pallidicinctus (lesser prairie-chicken): 128085477
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Entry
128085477 CDS
T08967
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00100
Steroid biosynthesis
tpai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
128085477 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tpai01006
]
128085477 (FDFT1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
128085477 (FDFT1)
Prenyltransferases [BR:
tpai01006
]
Terpene biosynthesis
Squalene/phytoene synthase
128085477 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
128085477
NCBI-ProteinID:
XP_052548933
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYHLLRFKMGGYRVVMPRMDPDSLGLGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTIEDDMTISLDVKVPMLIEFHSYLYQPEWKYMESKEKHR
QVLEDFPTISMEFRNLAKVYQDVISDICHKMGVGMAEFLEKKVDSQSEWDRYCHYVAGLV
GIGLSRLFSASELEDPIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
TKKLSDLTKPENIDMAVQCLNELITNALRHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGVVKIRKGQAVTLMMDATNMQSVKAIMYQYVEEIYQKIPSTDPSSNKT
QQIIASIRAMSLPSGPMASRHHYSPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctaaggaaatggctggggcaccccgaggacatctaccacctgctgcgcttc
aagatgggcggctaccgcgtcgtcatgccgcggatggacccggactcgctgggactcggg
ctccgcacctgttaccgctacctcaaccagaccagccgtagcttcgccgccgtcatccag
gcgctggatggagagctgcggcatgctgtctgtatattttacctagttctccgtgccctg
gacaccatagaggatgacatgaccatcagcttagacgtaaaggtcccgatgctgattgag
tttcactcttatctctatcaaccggagtggaaatacatggagagcaaggagaagcaccgg
caggtgctggaggacttcccaacaatctccatggagtttaggaacctggcaaaggtgtac
caggatgtgatttctgatatttgtcacaagatgggtgttgggatggcggagttcttggaa
aagaaggtggattctcagagtgaatgggatcggtattgccactatgtggctgggctggtg
gggataggcctttcccgactcttctctgcatcagagctggaagatcctattgtaggacag
gacacagagctggcaaactccatgggcctcttcctgcaaaaaaccaacatcatacgtgac
tatctagaagaccagctggaaggaagggagttctggccaagggaggtttggagcagatac
acaaagaagctctctgaccttaccaagccagagaacatagatatggctgtgcagtgtctg
aatgagctcatcaccaatgctctccgccacgtacctgatgtcctcacttacttgtctcgc
ctgaaaaaccaaagtgtcttcaacttctgtgctatcccccaggtgatggctattgccact
cttgctgcctgctacaataacaagcaggtgttcagaggggtagtgaagattcggaaggga
caagctgtcactctgatgatggatgccacaaacatgcaatctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatccccagcacggacccttcatccaacaagacg
cagcagatcatcgcctccatccgtgccatgagcctgcccagcggccccatggcctcacgc
catcactattcccccatctacctgtcctgtgccatgctcctggctgccctcagctggcag
tacctcagcaccatctccaaggccaccgaagagtacgtccaggcgggtgagaactga
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integrated database retrieval system
