KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128085527
Entry
128085527         CDS       T08967                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510  Focal adhesion
tpai04520  Adherens junction
tpai04530  Tight junction
tpai04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128085527 (ACTN1)
   04520 Adherens junction
    128085527 (ACTN1)
   04530 Tight junction
    128085527 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128085527 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tpai04131]
    128085527 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tpai04812]
    128085527 (ACTN1)
   04147 Exosome [BR:tpai04147]
    128085527 (ACTN1)
Membrane trafficking [BR:tpai04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    128085527 (ACTN1)
Cytoskeleton proteins [BR:tpai04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     128085527 (ACTN1)
Exosome [BR:tpai04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128085527 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   128085527 (ACTN1)
  Exosomal proteins of bladder cancer cells
   128085527 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5 XisI Uds1 FAZ1_C U3_assoc_6
Other DBs
NCBI-GeneID: 128085527
NCBI-ProteinID: XP_052549067
LinkDB
Position
Unknown
AA seq 893 aa
MDHHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGN
VKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN
RAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQ
KDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKI
CDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQE
INGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIE
MHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLG
YDIGNDAQGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGD
KNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggatcatcactacgacccgcagcagaccaacgattacatgcagccggaggaggactgg
gaccgggacctgctcctcgacccggcttgggagaagcaacagcggaagacatttacagca
tggtgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttc
agggatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaag
cctgaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggctttggatttc
attgccagcaaaggagtcaaactagtatcaattggagcagaagaaattgtggatggcaat
gttaaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatc
tcagttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagcc
ccctacaaaaatgtaaacatccaaaacttccatatcagttggaaagatggccttggtttc
tgcgctttaattcacagacatcgtccggagctcattgattacgggaagctacgaaaggat
gatcctctcactaatctaaacacagcctttgatgtagctgaaaaatatctggatatcccc
aagatgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatg
acctatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagca
aatcgtatttgcaaggtgctggcagtcaaccaagagaatgaacagctcatggaagactat
gaaaaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaac
cgggcaccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactac
cgccgcctgcacaagccccccaaagtccaagagaagtgccaacttgagatcaatttcaac
accttgcagaccaagctacggctcagcaacaggccagccttcatgccttcagaagggaaa
atggtttctgatataaacaatgcctggggtggcctagagcaggctgagaagggctatgag
gagtggttgttgaatgagatccggaggctagagaggttggatcacctggctgagaagttc
cggcagaaggcatctattcacgagtcctggacagatggtaaggaagcgatgctgcagcag
aaggattatgaaactgctaccctctcggagataaaggcactgctgaagaaacacgaggcc
tttgagagcgacctggctgcacaccaagaccgcgtggaacagattgctgctattgcacaa
gagctgaatgagctggactattacgattctccaagtgtcaatgccaggtgccagaagatc
tgtgatcagtgggataatctgggtgccctaacccagaaacgtagagaagctttagagagg
acagagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcc
cccttcaataactggatggaaggggccatggaggacctccaggacacattcattgttcac
accattgaggagatccagggattgaccacagcccacgaacagttcaaagccactttgcca
gatgctgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtc
caaacgtaccacgtcaacatggcaggaacgaatccttacactacaatcaccccacaagag
atcaatggcaaatgggaacatgtgcggcagctggttcctagaagggatcaagccctaatg
gaagaacatgctcgccagcagcaaaatgagcggcttcgtaagcagtttggtgcacaagcc
aatgtcatcggtccctggattcagaccaagatggaggagattggccgcatttcaatagag
atgcatgggactctggaggaccagctcaaccacttgcggcaatatgagaaaagcattgtg
aattacaaaccaaagatcgaccagttggaaggagaccaccaacagatccaggaggcgctt
atctttgacaacaagcacaccaactacaccatggagcatattcgagtgggctgggagcag
ctattaacaacaattgctagaaccattaatgaagtggaaaatcagattctgacccgtgat
gccaaaggaataagccaggaacagatgaatgagttccgagcctctttcaaccattttgac
agggaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggt
tacgatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtc
gaccccaatcgcatgggtgtagtgacgttccaggccttcatcgacttcatgtctcgggaa
acagcagatacagatactgctgaccaggttatggcttctttcaagatcctggctggagat
aagaactacatcactgtggatgagttacggcgggaactgcctcctgatcaggctgagtac
tgcattgctagaatggcaccctacaatggccgtgatgctgtacccggtgccctggactac
atgtctttctccacggcgctctatggcgaaagtgacctttaa

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