Tympanuchus pallidicinctus (lesser prairie-chicken): 128085527
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Entry
128085527 CDS
T08967
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510
Focal adhesion
tpai04520
Adherens junction
tpai04530
Tight junction
tpai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128085527 (ACTN1)
04520 Adherens junction
128085527 (ACTN1)
04530 Tight junction
128085527 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128085527 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128085527 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tpai04812
]
128085527 (ACTN1)
04147 Exosome [BR:
tpai04147
]
128085527 (ACTN1)
Membrane trafficking [BR:
tpai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128085527 (ACTN1)
Cytoskeleton proteins [BR:
tpai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128085527 (ACTN1)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128085527 (ACTN1)
Exosomal proteins of colorectal cancer cells
128085527 (ACTN1)
Exosomal proteins of bladder cancer cells
128085527 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
128085527
NCBI-ProteinID:
XP_052549067
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MDHHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGN
VKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN
RAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQ
KDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKI
CDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQE
INGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIE
MHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLG
YDIGNDAQGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGD
KNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcactacgacccgcagcagaccaacgattacatgcagccggaggaggactgg
gaccgggacctgctcctcgacccggcttgggagaagcaacagcggaagacatttacagca
tggtgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttc
agggatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaag
cctgaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggctttggatttc
attgccagcaaaggagtcaaactagtatcaattggagcagaagaaattgtggatggcaat
gttaaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatc
tcagttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagcc
ccctacaaaaatgtaaacatccaaaacttccatatcagttggaaagatggccttggtttc
tgcgctttaattcacagacatcgtccggagctcattgattacgggaagctacgaaaggat
gatcctctcactaatctaaacacagcctttgatgtagctgaaaaatatctggatatcccc
aagatgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatg
acctatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagca
aatcgtatttgcaaggtgctggcagtcaaccaagagaatgaacagctcatggaagactat
gaaaaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaac
cgggcaccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactac
cgccgcctgcacaagccccccaaagtccaagagaagtgccaacttgagatcaatttcaac
accttgcagaccaagctacggctcagcaacaggccagccttcatgccttcagaagggaaa
atggtttctgatataaacaatgcctggggtggcctagagcaggctgagaagggctatgag
gagtggttgttgaatgagatccggaggctagagaggttggatcacctggctgagaagttc
cggcagaaggcatctattcacgagtcctggacagatggtaaggaagcgatgctgcagcag
aaggattatgaaactgctaccctctcggagataaaggcactgctgaagaaacacgaggcc
tttgagagcgacctggctgcacaccaagaccgcgtggaacagattgctgctattgcacaa
gagctgaatgagctggactattacgattctccaagtgtcaatgccaggtgccagaagatc
tgtgatcagtgggataatctgggtgccctaacccagaaacgtagagaagctttagagagg
acagagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcc
cccttcaataactggatggaaggggccatggaggacctccaggacacattcattgttcac
accattgaggagatccagggattgaccacagcccacgaacagttcaaagccactttgcca
gatgctgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtc
caaacgtaccacgtcaacatggcaggaacgaatccttacactacaatcaccccacaagag
atcaatggcaaatgggaacatgtgcggcagctggttcctagaagggatcaagccctaatg
gaagaacatgctcgccagcagcaaaatgagcggcttcgtaagcagtttggtgcacaagcc
aatgtcatcggtccctggattcagaccaagatggaggagattggccgcatttcaatagag
atgcatgggactctggaggaccagctcaaccacttgcggcaatatgagaaaagcattgtg
aattacaaaccaaagatcgaccagttggaaggagaccaccaacagatccaggaggcgctt
atctttgacaacaagcacaccaactacaccatggagcatattcgagtgggctgggagcag
ctattaacaacaattgctagaaccattaatgaagtggaaaatcagattctgacccgtgat
gccaaaggaataagccaggaacagatgaatgagttccgagcctctttcaaccattttgac
agggaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggt
tacgatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtc
gaccccaatcgcatgggtgtagtgacgttccaggccttcatcgacttcatgtctcgggaa
acagcagatacagatactgctgaccaggttatggcttctttcaagatcctggctggagat
aagaactacatcactgtggatgagttacggcgggaactgcctcctgatcaggctgagtac
tgcattgctagaatggcaccctacaatggccgtgatgctgtacccggtgccctggactac
atgtctttctccacggcgctctatggcgaaagtgacctttaa
DBGET
integrated database retrieval system