Tympanuchus pallidicinctus (lesser prairie-chicken): 128085531
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Entry
128085531 CDS
T08967
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
SH3_2
Ank_5
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128085531
NCBI-ProteinID:
XP_052549071
LinkDB
All DBs
Position
Unknown
AA seq
1858 aa
AA seq
DB search
MYADRVKSLNMPRSPTSSEDEMAQSYSDYSVESESDSSKEETIYDTIRATAEKPSSRMDD
SQSNTLVIRIIIPDLQQTKCIRFNPEASVWVAKQRILCTLNQSLKDVLNYGLFQPASNGR
DGKFLDEERLLREYPQPVNKGVPSLEFRYKKRVYKQFNLDEKQLAKLHTKANLRKFMDHV
HHLSVEKITKMLDRGLDPNYHDLESGETPLTLAVQLDNTVEVIKALKNGGAHLDFRARDG
MTALHKAARAKNQVTLKTLLELGASPNYKDSCGLTPLYHTAVVGGDPYCCELLLHEHATV
SCKDENGWQEIHQACRYGHVQHLEHLLFYGADMCAQNASGNTALHICALYNQESCARVLL
FRGANKEIKNYNSQSPFQVAIIAGNFELAEYIKNHREADIGSCFSYPSRSPRNLLLPVPF
REAPTYSNRRRRPPSTLAAPRILLRSNSDNNLNINNIPEWSASSSASSHRSLSPHLLQQM
QNNPNGTVKTVGSYTPSSRSRSPSLNRLGEDGKRQQHRHISAVYNPSANKDTLSALDYQG
PKRKLYSAVPGRLFIVVKPYQPQGEGEIHLHKGDRVKVLSIGEGGFWEGSTRGHIGWFPA
ECVEEVQCKPNESKPETRTDRTKKLFRHYTVGSYDSFDASSDCIIEEKAVVLQKKDNEGF
GFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVG
HRQVVNMIRQGGNHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELE
ELDKVDEIVPVSKPSRIADNATVDSRVATIKQRPSSRCFPSATDMNSMYERQGIAVMTPT
VPGSPQGPFLGIPRGTMRRQKSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSL
PPSPPPPSPSLYNAPKSPTSRSYGTIKPPFNQNSGAKISLVRPENVGTMMRDKGIYYRRE
LDRYSLDSEDLYSRSATAQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVK
QSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQSSEQPGQLRPDDSLGVS
SPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLTPPTPRMRQSKFTDEAMFSSE
DGFRQLMSPSPIPAPREPENLFNSSDPSNQSDARTLNTSSKTKGTENSTAAAKSTNASTS
DNYVHPVTGKLLDPNSPLALALSARDRAMKEQTQQIPGKVDTVKADLNKPLYIDTKLRPN
IETTFPVTATVSRQNTRGPLRRQETENKYETDAGKEKKAEEKKNMLINIVDTSQQKSAGL
LMVHTVDTAKSDDTPEDEEEKGAEMEPSPENSLTERPEGSEEAESELNVPAVPEPPASPC
KTIVAASSVDDPVILPFRIPPPPLASVDIDEEFIFTEPLPPPLEFANSFDIPDDRSVPAS
ALTDLIKQRKNGTPSPAPFVTSQPTNSLDSKKQVGLSNCLPASFLPPPDSFDNVTDSGIE
EVDSRSSSDHHLETTSTISTVSSISTLSSEGCENVDTCTVYADGQTFLVDKPPVPPKPKM
KPIINKSNALYKDALIEETVDSFVIPPPAPPPPPISAQPNMAKVVPQRTSKLWGDVTEVK
SPILSGPKANVISELNSILQQMNREKSSKPGEGLESPTGTKTASLSTRSTEVMSTVSGTR
STTITFTVRPGTSQPITLQSRSPDYDSRTSGARHAPSPVVSPTEINKDIMPAPLTASASA
SSPSPTLSDVFSLPSQPPSGDLFGLTTGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDV
ADWLESLNLGEHKETFMDNEIDGTHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgacagggtaaaaagcttgaacatgcctcgtagcccaacatcaagcgaagat
gaaatggcacagagctattccgactattctgttgagtctgaatctgacagttccaaagag
gaaactatttatgacacaattagagcaactgcagaaaagccaagcagcagaatggatgac
agtcagagcaacactctggtgattcgaattataatacctgatctccagcaaacgaaatgc
attagatttaatccagaagcttcagtgtgggtcgcaaagcaacgaattttgtgcactttg
aatcagagtttgaaagatgtcctgaattatggactgttccagccagcaagcaatggtaga
gatggaaagttcttggatgaggaacgacttctcagggaatatccacagccggtgaataaa
ggagttccttccctagagtttcgatacaagaaaagagtgtacaaacagttcaatcttgat
gaaaaacagctggccaaacttcatacaaaggctaacttgagaaaatttatggatcatgtc
catcatctctcagtggaaaaaatcacaaaaatgttggaccgaggactggaccccaactat
catgacctagaaagtggagaaacaccactaactttggcagttcaacttgacaatacagta
gaagtgataaaagctctgaaaaatggaggagcacatttagacttcagagccagagatgga
atgacagctctgcacaaagcagccagagccaaaaaccaagtaaccctcaagactctttta
gagctgggagcatctcctaactacaaagacagctgtggcctgacaccgctgtaccacact
gctgttgtggggggggatccttactgctgtgaacttcttcttcatgaacatgctacagtt
agctgcaaagatgaaaacggatggcaagaaattcatcaggcttgccgatatggacatgtc
caacatctggagcatcttctcttctatggtgctgacatgtgtgcgcagaacgcatcggga
aacacagcgctgcacatctgtgctctttacaaccaggagagctgtgccagagtgctgcta
ttccgtggagcaaataaggagattaagaattacaacagccagtctccatttcaggtggct
ataatagcaggaaattttgagcttgctgaatatatcaagaatcacagggaagctgatatt
ggatcctgcttctcatatccaagtagaagtccccggaatctgttgctaccagtgcccttt
agggaggctcctacctactcaaacagaaggcggagacccccgagcaccttagcagcacca
cgtatcttgcttcgttccaacagtgacaacaacctgaacatcaacaatatccctgagtgg
tcagcctcctcttctgcgtcttcccaccgcagcctttcacctcatctacttcaacagatg
cagaataatcctaatggaactgtaaaaactgtagggagctacacaccatcctcccggagc
cggtcaccgtccctaaacaggttgggagaggatggcaaacggcagcagcacaggcacatc
agtgctgtttacaatcctagtgccaacaaggatactctgtctgccttggattatcagggt
ccaaaacgcaagctttacagtgctgtacctggaagactttttattgttgtaaagccatat
caacctcaaggagaaggggaaattcacctgcataaaggagacagagtaaaagttttaagc
attggagaaggtggattctgggaaggcagcacccggggacatattggatggtttcctgca
gaatgtgttgaagaagttcagtgtaaaccaaatgaaagcaaaccagaaacacgaacagat
agaacaaagaaactgtttagacactacacagttggatcttatgacagctttgatgcttca
agtgactgcattatagaagaaaaggcagtggtcctgcagaaaaaagacaatgaaggattt
ggatttgtgctcagaggggcaaaagctgacacaccaattgaagaattcaccccaactcca
gcctttcctgctttgcagtacttggaatctgtggatgaagggggagtagcatggcaagct
ggcctgagaaccggagactttttgatcgaggttaataatgagaatgttgtgaaagttggc
cacaggcaggtggtgaatatgatccgacaagggggcaatcacctagttctaaaggttgtc
acagtaacaaggaatcttgatccagatgacacagctagaaagaaagccccaccacctcct
aagcgagctccaaccactgcactgaccttgcggtctaagtcaatgacctcagagcttgaa
gagcttgataaagtggatgaaatagtaccagtttccaagccatcaagaattgcagacaat
gcaactgtggattcaagagtggcaactattaaacagcggccttctagtagatgttttccc
tcagctacagatatgaattctatgtatgagagacagggtattgctgtgatgacgcccact
gtaccagggagtccacaaggtccttttctgggtatacctcggggtacaatgagaagacaa
aaatctataggaataacagaggaagaacggcagtttttggctcctcctatgctgaagttt
accagaagtctttcaatgcctgacacctctgaagatatccctccaccaccgcagtcctta
cccccttcaccaccaccaccttctccctctctgtacaacgctcccaaatccccaacgtca
aggagctatggaactatcaaacctccatttaatcagaattcaggtgcaaaaatttctttg
gttaggcctgaaaatgtgggaacaatgatgagggacaaagggatctattacagacgagaa
ctggaccgctactctctggactctgaggacctgtacagtcggagtgccacagctcaggca
aatttcaggaacaaaagaggtcagatgcctgaaaacccatattctgaggttgggaagatt
gcaagcaaagcagtttatgtaccggccaaaccagcaaggcggaaggggatgctagttaaa
caatccaatgttgaagatagtccagaaaagacctgctctattccaatccccacaattatt
gtgaaagagccgtccaccagcagcagcgggaagagcagccaagggagcagcatggaaatt
gaccctcagtcttcagaacaacctgggcaactccgacctgatgacagtttaggtgtcagc
agtccatttgcagcagccattgctggagcagtgagggacagggaaaagcggctggaagca
aggcgtaattctccagccttcctctccacagacctaggagatgaagatgttggactaaca
ccaccaacaccacgtatgaggcaatctaaatttactgatgaagcaatgtttagtagtgaa
gatggctttaggcagcttatgtcaccatctccaattcctgcacctagagagcctgaaaat
ctttttaatagcagtgatcccagcaatcaaagcgatgcaaggacattaaatacttcgtcc
aaaacgaagggtactgaaaacagtacagcggcagctaagtccacaaatgcatccacctcc
gataattacgttcacccggtcacaggaaagctgctagatccaaactcaccgctagccctc
gctctctctgccagggacagagccatgaaagaacaaacacagcagattccaggcaaagtg
gacactgttaaggctgaccttaataaaccactttacatcgatacaaagctgagacccaat
attgaaacgacatttcctgttactgctactgtctctaggcaaaatactcgtggtccacta
cgaaggcaggagactgagaacaagtatgaaacagatgcagggaaagaaaagaaggctgaa
gagaagaaaaacatgttgataaacattgtggatacttcacagcagaagtcagctggctta
ttaatggttcataccgtggacacggcaaagtcggatgatacacctgaggatgaagaggaa
aagggagctgaaatggaaccgagccccgaaaactccctgacagagaggccagaggggagc
gaggaagctgaaagtgagctgaacgtgcctgctgtgcctgagccaccggcatctccctgc
aaaaccattgtggcggcgagctctgtcgacgacccagtcatcttgcccttccgcatcccc
ccaccacccttagcatcagttgatattgatgaagaatttatttttactgagccactacca
ccccccttagagtttgccaacagctttgacatccctgacgaccgctcggtgcccgcttca
gctctcacggacttgattaagcaaaggaaaaacggcacaccttcacctgcgccattcgtc
accagccagccaaccaattctttagacagtaaaaagcaagtgggtctttcaaactgtttg
cctgcctcctttctgccaccccctgatagctttgacaacgtcactgactctgggattgag
gaggtagacagtcggagtagtagtgaccatcacttagagacaaccagcactatctcaacg
gtgtccagcatctctaccttatcctcggaagggtgcgagaacgtggatacttgtacagtc
tatgcagatgggcaaacatttctggtggacaaacccccagtacctcctaagccaaaaatg
aagcccataatcaacaaaagcaatgcactttacaaggatgcgctaattgaagaaactgta
gacagctttgttattcctcctcccgctccacccccacctcccatcagtgcgcagcccaat
atggcaaaggttgttccccagaggacatctaagctatggggggatgtgacggaggtgaaa
agcccaattctctcaggcccaaaggctaatgttattagtgaattgaactcaatactccag
caaatgaatagagagaaatcctcaaagccaggggaaggattggagtcacctaccggaaca
aaaactgcaagtctcagtacaaggagcacagaagtcatgagtactgtctcaggtacacga
agtacaacaatcactttcactgtccgacctggaaccagccagccgatcacactgcagagc
aggtccccagactatgacagtaggacctcaggagcacggcatgctccaagccctgtggtt
tcaccaacagagattaataaagacatcatgcctgctcctctgactgcttctgcttcagct
tcatctccttctccaactctgtctgatgtatttagcctacccagccagcccccctctggg
gacttatttggcttgaccacagggcgcagcaggtctccttctccctcaatattacaacag
ccaatctcaaataagccttttacaactaagcctgtccacctgtggactaaaccagatgtg
gcagattggttggaaagtctaaacttaggtgaacacaaagaaacatttatggacaatgaa
atagatggcactcatttaccaaatctacaaaaggaagatctgatagaccttggagtgact
agagttgggcacagaatgaacatagaaagagctttgaaacagctgctggacagataa
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integrated database retrieval system
