Tympanuchus pallidicinctus (lesser prairie-chicken): 128085585
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Entry
128085585 CDS
T08967
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128085585 (TRDMT1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
128085585 (TRDMT1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128085585 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
128085585
NCBI-ProteinID:
XP_052549179
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MAALRVLELYSGIGGMHQALKESCVCAEVVAAVDVNTLANEVYKHNFPSTPLWAKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLRTLETCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHHEPFFFHVPG
QILTRFPDQNLEELSKDEVVDEASSSLPSGEKSLLSNTGSDCSSKNGPLPKESFLFKLET
VEEMVRKHSQDNDPSIQMLQDFLEDENEEMSQYFLAPKSLLRYAFLLDIVKPTCRRSTCF
TKGYGHYVEGTGSVLQTAVDVQLESVFKHIESLTEEEKLMKLSTLKLRYFTPREIANLHG
FPPEFGFPDKVSIKQCYRLLGNSLNVHVVAKLISVLLG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgcgagtgctggagctgtacagcggcatcggggggatgcaccaggctctg
aaagaaagctgtgtatgtgcagaagttgttgctgctgtggatgtgaacactcttgccaat
gaagtttataagcacaactttcccagcacaccattatgggcaaagacaattgagggcatt
acactgaaagaatttgacagattatcttttgatatgattttgatgagtcctccctgccag
ccatttacaagaattggcctacaaggtgatgtatctgatccgaggacaaagagctttctt
tatattcttgatattctcccaaggctccagaagcttccaaaatacctacttttagaaaac
gttaaaggatttgaatcctcttctgcaagaaatgaacttctgcgaacactagaaacatgt
ggatttaaatatcaagaatttcttttgtctccaacctgtcttggcattcccaattctagg
ctgcggtattttctaattgcaaagcttcaccacgagccgtttttctttcatgttcctggt
cagatattgacaagattcccagatcagaatctagaagagttatccaaggatgaagttgtt
gacgaagctagttcttccttgccttctggagagaagagtctactttcaaacactggttct
gattgcagcagcaagaatggacccttgccaaaagagtcctttctttttaagcttgaaaca
gtagaagaaatggtaaggaagcatagtcaagacaatgatccctctattcaaatgttacaa
gatttcctggaagatgagaatgaagaaatgagtcagtattttttagcacccaagtccttg
ctacgctacgctttcttattagacattgttaaacccacttgccggagatccacatgcttt
acaaaagggtatgggcactatgtagaagggacaggctccgttctgcagacagcagtagat
gtgcagcttgaatcagtgtttaagcacattgagagcttaacagaagaagagaagcttatg
aaactgtcaacgctaaaactgaggtattttactccaagagaaatagcaaatctgcatgga
ttccctccagaatttggctttcctgacaaagtatcaataaagcaatgctaccgtcttctg
ggaaacagcctcaacgtacacgtggtggcaaagttgatctccgttctactcggataa
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