Tympanuchus pallidicinctus (lesser prairie-chicken): 128085593
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Entry
128085593 CDS
T08967
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128085593 (VPS50)
Membrane trafficking [BR:
tpai04131
]
Protein recycling
Others
EARP complex
128085593 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
128085593
NCBI-ProteinID:
XP_052549196
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIENLRFPTKEELRESWEEPTDPQAQQEIINSIEEV
YFSNDAFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQNGLQLAAVICADGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAATASSV
SDGSSVVGAEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSN
FSILQLHEFKFMVQSRSPSVSPSKQPASAISATVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSKKKSDY
SLNKGNAPILTNTTLNVVRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTPMPSSSLSTSNREQPSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTA
AEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFECLQPHLDAVMPAAK
KPFLQQFYSQTVSTANELRKPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDS
LLKEFEEFNRRLNEVSKRVRIPLIVSNILWEHCMRLANRTLVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKHLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcctattgaaaacctccggtttcctactaaggaggaactcagagaatca
tgggaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgatgcctttgatattgtgaagtatgaattagagaggcttcctcctgta
cttagtcttcaagaactggaagaatatagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacaacctgcatacgttcaggaactggaa
cgtgttacatcgttgcagaatggccttcagttagcagctgttatttgtgcagatggaaga
agacacctgaatattgcaaaggaaggcttcacacaaaccagtttgggacttcttgcaaac
caaaggaaaagacagttgcttattggactattgaagtctctgaggacaataaaaacactg
caaagaactgatgtgcgtttaagtgagatgctggaggaagaggactatccaggagctatt
caactgtgtttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttgaattcaaaactgcaagatactttggaacaaatagaggaacaactggatgtagcg
ctctcgaagatatgtaagaactttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttgggaaaacacagacagcaatggaccaattgcacatgcacttcactcaagct
attcacaacactgtgtttcaagtagtgcttggatatgtggagctttgtgcaggaaacaca
gacaccaagtttcagaagttacaatacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagccctttgggaagtcatgctcagctattac
cgaacgatgcagtggcatgagaatcatgatcaagatgaggcagcaactgcgtcttctgtt
tcagatggcagcagtgtggttggagctgaggagaacagttttgaccgcagctatgtgaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcagctgaaagtgaaaacg
taccttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggctaatgcaagttggagaagagttttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgccccgttaaatcaaac
ttcagcattttacagcttcacgaatttaaattcatggttcagtcacgttccccatctgtg
tcacctagtaagcagcctgcttcagcaatttcagcgacggtaactttatttgagcagtac
tgtaatggaggaaacccatttgaaattcaggctgacagcaaagatgatgagacagaggat
gtgttagcttccaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaagagtat
gatagtgacagcgacgttcctgaagagttgaaaagagactatgtagatgagcagacagga
gatgccccgatgaagagtgtttctcgagaaactctgaggagcaaaaagaaatcggattat
agcctcaataaagggaatgcacctatcctgacaaacactacactcaatgtagtaaggctt
gttgggaagtatatgcagatgatgaacattctcaagcctattgcatttgatgtcatccac
ttcatgtcccagctcttcgactactatctgtatgcagtctatacattttttggccgaaat
gatacgcctatgccgagttcctcactttctacttctaacagagaacagcccagtgctagg
cagtttgaatcgacaggattgggcctcagtagtagcagattacgcaccacactgaacaga
atccaggagagcctcattgatctagaggtctccgctgatcccacaggaactctcacagct
gctgaagaaagaaaggagaaggtgccaagcccacatctcagtcatctagttgttttgact
tctggcaactcactctatggtttggcagagagagtggtagccacggaatccttggtattt
ctggctgagcagtttgagtgtcttcagccccaccttgatgcagtgatgccagctgcaaag
aagccttttcttcagcagttctattctcagactgtgtcaactgccaatgagctacgcaaa
ccagtttattggattgttgctgctaaagctattgattatgaacagatgctgcttctcatg
gctaatgtaaaatgggatgtaaaggaaatcatgtcacaacacaatatatacgtagactct
cttttaaaggagtttgaagaatttaacagaaggttgaatgaggtatctaagagagtccgt
attccactaatagtctcaaatatactttgggagcactgcatgcgcttggccaatagaact
cttgtggaaggttatgctaatgtgaagaaatgcagtaacgaaggacgtgccttgatgcaa
ctggactttcaacaattcttaatgaaactagaaaagctaacagacattaggcctattcca
gataaagaatttgtggagacctacattaaagcctactacttaactgaaaatgacatggag
cgctggataaaggaacacagggaatattccactaagcacctgacaaatctggtgaatgtt
tgtctggggtctcacatcaacaagaaggcaagacagaagctgctagctgctattgatgac
atagataggcctaaaagataa
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