Tympanuchus pallidicinctus (lesser prairie-chicken): 128085840
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Entry
128085840 CDS
T08967
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128085840 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tpai04515
]
128085840 (LRRC4C)
Cell adhesion molecules [BR:
tpai04515
]
Immunoglobulin superfamily
NGL family
128085840 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
128085840
NCBI-ProteinID:
XP_052549709
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPLESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcagcttcttgtggtagctggt
ctagtgagggctcaaacttgcccttcagtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaacctacatgagaaccagatccaaatcattaaggtgaatagcttcaagcatctgagg
cacttagaaatactgcagctcagcaggaatcacatcagaacaattgaaataggggccttc
aatggtctggccaatcttaatactttggaactctttgacaatcgtctgaccactatccca
aatggagcttttgtatacttgtcaaaactgaaggaactttggttgagaaacaaccccatt
gagagcataccctcttatgcttttaacagaatcccttctctccggagactggatttggga
gaattgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttaaga
tatttgaaccttgccatgtgcaatctgcgagagattcctaacctcactccacttgtaaaa
ctggatgagttagacctttctggaaatcacttgactgccatccggccaggttccttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcaatcacttgtggagatcaatctggcacacaacaatctaaca
ctactgcctcatgacctgttcacaccactccgtctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tctaatactgcatgctgtgcccgttgccacacacctcccagtttgaaaggaaggtacatt
ggtgagctggacctgaactatttcacgtgttatgctccagtcatagtggagccaccagca
gacctgaacgtcactgaaggcatggctgcagagatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaatggatctgttatgacacatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtatacatgcatggtgagtaactctgttgggaataccacagcttctgccacactg
aatgtgactgccctggataaccccggctatacatatttttcaactgtcacagtggagact
gtggaaccttctcaggatgaggcacagacaacagagcaggttgggcccacaccagttacc
aactgggagaccactaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacgttcaccattcctgtgacggacgcaaacaacgggatcccaggaatagatgaggtt
atgaagactactaaaatcataattggttgttttgtggctatcactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcaaaaccatcatgctcca
acacggactgtagaaatcataaacgtggatgatgagcttacaggtgacacacccttagag
agtcacttgcccatgccagcaattgagcatgagcacctaaatcactataactcttataag
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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