Tympanuchus pallidicinctus (lesser prairie-chicken): 128085849
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Entry
128085849 CDS
T08967
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128085849 (ZEB1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128085849 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
128085849
NCBI-ProteinID:
XP_052549754
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVIEANSDSDDEDKLHIVEEESITDAADCDASVPED
DLPTDHAVLPENSEREGSTNSCWEDEGKETKEILGPEAQSDEVGCTVKEDECDSDAENEQ
NHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGYK
RFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDQRHVTQSSGNRKF
KCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVNG
RARSGLKTSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIVV
ASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAV
DGNVIRQVLENNHANLASKEQETISNASIQQAGHSLISAISLPLVDQDGTTKIIINYSLE
QPSQLQVVPQNLKKEHSVPTNSCKNEKLPEDLTVKSEKDKSFEGESNDSTCLLCDDCPGD
LNALQELKHYETKNPPQLPQSSGTEAEKPSSPAPSETGENNLSPGQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKISSPTDNED
QAATANESEPQNSTNNSQNPADTSKSQTSSGGSTQNGSRSSTPSPSPLNLSSSRNSQGYT
YTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQKD
NSITDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIPQ
VAYTYSTTVSPAVQETPPKQTQANGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTE
NGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPY
QCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEVGQEVLSSEHAGARASPSQI
DSDERESLTREEEEDSEKEEEEEEDKEVEGLQEEKECRKLQDVEEEEEVEEEEEEEEGKT
EGNKNDDVVNRASDAEPEVIQSNGQVSEEKTNKA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgaggcgcaacaacgtc
accaattacaataacgtgatagaagcaaattcagattcagatgatgaagataaattgcat
atagtggaagaagaaagtataactgatgcagcagactgtgatgcaagcgtgccagaagat
gacttgccaacagaccacgcagtgttaccagaaaacagtgaaagggaagggagcacaaac
agctgctgggaagatgaaggaaaagaaacgaaggaaatcctggggcctgaagctcagtca
gatgaagttggatgtacagtaaaagaagatgaatgtgattctgatgcagaaaatgaacag
aaccatgaccctaatgttgaagaattccttcaacaagaagatacagctgttatttaccct
gaagcacctgaggaggaccagagacaaggcacaccagaagctagtggtcaggatgaaaat
ggaacacctgatgcattttcccagctgcttacctgcccgtactgtgatagagggtacaag
cgctttacctctctgaaggaacacattaaataccgccatgaaaaaaacgaggataacttc
agttgctccctttgcagttacacgtttgcatacagaacacagctggaccgccacatgacg
tcgcacaagtcgggacgagatcagagacatgtgacgcagtccagtggtaatcgaaaattc
aagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcacctacga
atccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccattct
ggttcatacagctcacacataagcagtaagaagtgcattggtttgatgcccgtgaatggt
cgcgctcggtcagggctcaagacgtctcagtgctcctccccttccctttctgcatcgccc
ggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagagcaa
cttcctgttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtggtt
gcttcaggaattaattgttcgaccccattgcagaatggggtttttagtggtggtagccca
ttgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctgccaacagtgggt
ctggtgtcccccataagcatcaacttaagtgacattcaaaatgtacttaaggtggcagtg
gatggtaatgtaataaggcaagtattggaaaacaatcacgctaatcttgcatccaaagaa
caagaaacaatcagcaatgcatctatacaacaagctggccattctctcatttcagctatc
agtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttggaa
cagccaagtcaacttcaggttgttccccaaaatctaaaaaaagaacattctgttcctaca
aacagttgcaaaaatgaaaagttaccagaagatcttacggtgaagtctgagaaagataaa
agctttgaaggagagagcaatgatagcacttgtcttctttgtgatgactgtccaggagat
cttaatgcacttcaagaattaaagcactatgaaacaaaaaatcctcctcagcttcctcag
tccagtggaacagaagctgagaagcccagctcccctgccccatcagaaactggggagaac
aacttatctcctggtcagccccctttaaagaaccttttatcgctcctgaaggcatattat
gcattaaatgcacaaccaagcgcagaagagctttcaaaaatagccgattccgtaaaccta
ccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtgcag
tcttctggaccatcttctcccgaacaagttaaaataagcagtcccacagataatgaggat
caagcagcaactgcaaatgagagtgaaccccagaacagcacaaacaactcacaaaatccg
gccgatacaagtaaatctcagacttcatcagggggatcaactcagaatggttcgcgcagt
agcacgccatccccatcaccactaaacctttcttcatccagaaattcacagggttatacg
tacacagcagagggtgtacaagaagagccacaaattgaacctcttgacctttcactacca
aagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagtgtt
tattctgtccaggaagaacctttgaacttaacttgcgcaaaaaaagaaccacaaaaggac
aacagtattacagactctgatcctattgtaaatgtaatcccaccaagtgccaatcccata
aatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgaccag
aacagtgttccatgcttgagagctcttgctgccaataagcaaaccattttgattccccag
gtggcttatacgtactctactacagtcagtcctgcagttcaggaaacaccaccaaaacag
acccaagccaacggaaatcaggacgaaaggcaggacactagctcagaaggagtatcgaat
gtagaagatcaaaatgattctgattcaacacccccaaagaaaaagatgagaaagacagaa
aatgggatgtatgcatgtgatttgtgtgacaaaatattccagaagagcagctcgttattg
agacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaaaaagcc
ttcaaacacaaacaccatttgatcgaacacatgcgactgcattctggggagaaaccctac
caatgtgacaaatgcggaaagcgcttctcacactcggggtcatactctcaacacatgaat
catcgctactcctattgcaaaagagaggcagaggagcgtgacagcacggagcaggaggag
gtgggacaggaggtgctcagcagcgagcatgcgggtgccagggcatcgccatcgcagatc
gactccgatgagagagagagtctaaccagggaagaagaggaagatagtgaaaaagaggaa
gaggaggaggaagacaaggaggtagaaggacttcaggaagaaaaagaatgtagaaaacta
caagatgtagaggaggaagaagaagtagaagaagaagaagaagaagaggaagggaaaact
gaaggtaacaagaacgatgacgttgtaaatcgagcaagcgatgcagaaccagaagttata
cagagcaatgggcaggtgtcagaagaaaaaacaaataaagcttaa
DBGET
integrated database retrieval system
