Tympanuchus pallidicinctus (lesser prairie-chicken): 128086298
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Entry
128086298 CDS
T08967
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128086298 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpai01007
]
128086298 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128086298 (GARS1)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128086298 (GARS1)
Enzymes [BR:
tpai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
128086298 (GARS1)
Amino acid related enzymes [BR:
tpai01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
128086298 (GARS1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128086298 (GARS1)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128086298 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
DUF5915
Motif
Other DBs
NCBI-GeneID:
128086298
NCBI-ProteinID:
XP_052550681
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MPLLPPRSALPALLRLLSRLAGPLCRQSAPPSAPLPAATLMDGPQAEALLAPLRQAVRHQ
GELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFY
DQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGH
VDKFADFMVKDMKNGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQEL
ADLFVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEF
NQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQSVADLNIL
LYSSKAQLSGQSAHLMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPDKLRFRQHME
NEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKPLKEPISVNI
VQFEANKGAIGKAYKKDAKVVMEYLSMCDECYVTEMEQLLNDKGEFTVETEGKTFTLTKD
MVTVKRFQKTLHVEEIVPNVIEPSFGIGRIMYTVFEHTFRIREGDEQRTFFSFPAVVAPF
KCSVLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSIGRRYARTDEVGVAFGITIDF
DTVNRTPHTATLRDRDSMRQIRAEVSELPAIIRDLANGYLTWADVEAKYPQFEGQETGKK
DTIEE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgccgccccgtagcgctctgcccgccctgctgcgcctcctcagccgcctc
gccggcccgctctgccgccagtccgctccgccttccgctcctctcccggccgcgaccctc
atggatggccctcaagccgaggcgctgctcgcgccgctgcggcaggcggtgcggcatcag
ggagaactggtaaggaagctgaaggaagagaaagctccccaggtggatatagacagagct
gtagcagagctcaaagctcggaagagggtcctagaagcaaaggagttggccttacagccc
aaagatgacatcgtggacagagttaaaatggaagacactctgaaaaggaggtttttctat
gatcaagccttttctatttatggaggtgtcagtggcctgtatgacttcgggcctgtcgga
tgtgctttgaagaacaacatcatccaggcatggagacagcactttatacaggaggagcaa
atcctggagatagactgtaccatgctcacaccagagccagttttgaagacttctggccat
gtagacaagtttgctgactttatggtgaaagatatgaaaaatggggaatgttttcgtgct
gatcatctcttaaaagctcacctgcaaaagcttatgtctgacaagaagtgcacagcagag
aaaaaggcagaaatggaaaatgttctgacacagttggacaactatggccagcaagagctt
gcagatctctttgtaaactacaatgtgaagtcacccatcactgggaatgacctttcccct
cctgtttctttcaatctgatgttcaagacctccattggacctggaggaaacatgcctggc
tatctgaggccagaaacagcacaaggaatattcctcaacttcaaacgtcttctcgagttc
aaccaaggcaagctcccttttgctgctgctcagattggaaactccttcagaaatgagatc
tcgccccgatccggccttatcagagtgagggaattcaccatggcagaaattgagcacttt
gtggatcccagtgagaaaaatcatcccaagtttcagagtgtggcagatctcaacatcctc
ctgtattcttccaaggcccagctcagcgggcagtctgcccatttaatgcggctgggagat
gctgttcaacagggcgtgatcaataactccgttcttggttacttcattggtagaatctac
ctcttccttacaaaggttggtgtatcccctgacaagctgcgcttccgacagcacatggag
aatgagatggctcactatgcctgtgactgctgggatgcagagtccaaaacatcgtatggt
tggattgagattgtaggctgcgctgatcgttcctgctatgacctctcctgccatgctcgt
gccaccaaagttcctcttatagctgagaagcctctcaaagaacctatatcagtcaacatt
gttcagtttgaggcaaacaagggagccattggcaaagcttacaagaaggacgcgaaggtg
gtgatggaatacctttccatgtgtgatgagtgctacgtcactgagatggagcagctgctg
aacgacaaaggggaattcactgttgaaaccgaagggaaaacttttacattaacaaaggac
atggttactgtgaagagatttcagaaaacgttacatgtggaagaaatcgtcccaaatgta
attgaaccctcatttggtattgggagaatcatgtacacagtatttgagcacacattccgc
attcgggaaggagacgagcagagaacgttcttcagcttcccagctgttgtagcaccattc
aagtgctccgttcttcctctcagccagaatcaggaattcatgccttttgtcaaggaatta
tctgaagcactcaccaggaatggcatttctcacaaggtggatgattcctccggctccatc
ggccgacgctacgccaggactgatgaggttggcgtggcctttgggatcacaattgacttc
gacaccgtaaaccgaacgcctcacaccgccacgctgagagaccgcgactcgatgcgccag
atccgagctgaggtctctgaacttcctgccataattcgtgacctggcgaacggttatcta
acttgggccgacgtggaagccaagtatccacagtttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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