Tympanuchus pallidicinctus (lesser prairie-chicken): 128086310
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Entry
128086310 CDS
T08967
Symbol
LRP4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128086310 (LRP4)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128086310 (LRP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
DUF5050
EGF_LRP2
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
128086310
NCBI-ProteinID:
XP_052550732
LinkDB
All DBs
Position
Unknown
AA seq
1912 aa
AA seq
DB search
MRRRGGGCLSPAPPRLLLLLLGALLRARGITGSTECSCGRNHFTCAVSAFGECTCIPAQW
QCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRE
CEEDEFSCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSEKEFRCSDGSCIAEHWFCDG
DTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQ
PCRSGEFMCNSGLCINAGWRCDGDSDCDDQSDERNCTTSVCTADQFRCKSGRCVRLSWRC
DGEDDCSDNSDEENCENTGTPQCAPDQFLCGNGRCIGQRKLCNGANDCGDGSDESPHQNC
RPRTGEENCNVNNGGCAQKCQMVRGMVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGC
TNSEGGFQCWCEQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLEN
AIALDFHHSKELVFWSDVTLDRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTD
SGTSRIEVANLDGTHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEYSNMDGSNR
RIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGQNRKAVISQGLPHPFAITVF
EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAAGRNRCGANNGG
CTHLCLPSSKDYTCACPTGFRKTSSHACAQSLDKFLLFARRMDIRRISFDTDDLSDDVIP
LADVRSAVALDWDSKDDYVYWTDVSTDSISRAKWDGSGQEVVVDTSLESPAGLAIDWVTN
KLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPRDIVVDPVEGFMYWTDWGANPKIERAG
MDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGSNRKVLIGSNLPHP
FGLTLYGERIYWTDWQAKSIQSADRRTGQARETLQDNLENLMDIHVFHRHRPPVRTPCEV
NNGGCSHLCLLAPLPKGYSCTCPTGINLQSDGKTCSTGMTSFLIFARRTDIRMVSLDIPY
FADVVVSVNVTMKNTIAIGVDPHEGKVYWSDSTLRKISRAALDGSKFEDIITTGLLTTDG
LAVDAIGRKIYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIALYHEMGYMYWTDWGE
NAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGANRRTL
LSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKDSGANVILVRANLPGLMDIQAVDRARPL
GFNKCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTCDSSPETYLLFSSRASIRRIS
LDTSDHTDVHIPVPELNNVISLDYDSVDGKIYYTDVFLDVIRRSDLNGSNMETVIGQGLK
TTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVLINNSLDEPRAIAVFPKKGYLFWT
DWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNGKL
RQVLVSQVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSP
QRQTGTNACGVNNGGCTHLCFARASDFVCACPDEPDGRPCSTVPGVVPFGPEITSERSQT
PPGRIGTSTTKPLTSLEEEEGNCSDKDARRGLCTHANEAVLATMGEGLHVSYIIGGLLSI
LFILLLIASLIIYRHNKSKFTDPGLGNLTYSNPSYRTSTQEVKIETIPKPTMYNQLCYKK
ETGPDHSYTKEKIKIVEGICLLSSDDSEWDDLKQIRSSRGGILRDHVCMKTDTVSIQASS
GSLDDTETEQLLQEEQSECSSVNTAAATPERRGSLPDTGWKHQRKPSTESEV
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcgcggcgggggctgcctctcgcccgcgcctccgcggctgctgctgctgctg
ctgggagcgttgctccgcgccagaggcataacaggcagcaccgaatgctcctgtggacgc
aatcacttcacgtgtgcagtcagtgcttttggggagtgtacatgcatcccggctcagtgg
cagtgtgatggagacaatgactgtggggaccacagcgacgaggatggctgcatgctgccc
acttgctcccccttggacttccactgtgataatgggaagtgcatccgccggtcgtgggtc
tgcgatggagacaacgactgtgaggatgattctgatgaacaggactgcccaccacgagaa
tgtgaggaggatgagttctcgtgtcagaatgggtactgcatccgcagcctgtggcactgt
gatggtgacaatgactgtggagacaacagtgatgagcagtgtgatatgaggaaatgctca
gagaaggagtttcgttgcagtgatggcagctgcatagctgagcactggttctgtgatggt
gacacagactgcaaagatggttcggatgaagagaattgcccatcagatgttccagctgcc
acctgcagcttggaggaattccagtgtgcatatggacgctgcatcttggacatctaccac
tgtgatggcgacgatgactgtggggactggtctgatgaatctgactgctcatctcaccag
ccatgtcgctctggggagttcatgtgcaatagtggcttgtgcattaatgccggctggcgg
tgcgatggagactctgactgcgacgaccagtctgatgagaggaactgcactacatctgtg
tgtacagctgaccagttccgctgtaaatcagggcgctgcgtccgtttgtcctggcgctgt
gatggggaagatgactgctccgacaacagtgatgaggagaattgtgaaaatacagggacc
cctcagtgtgctccagaccagttcctgtgtgggaatgggcgttgcattgggcaacggaag
ctctgcaatggagcaaatgattgtggagatggcagtgatgagagcccgcatcaaaactgc
cgtccacgaacaggggaggagaactgcaatgtcaacaatggtggctgtgctcagaagtgc
cagatggtacgagggatggtgcagtgcacctgccatacaggttacaggcttctggaagat
ggccggtcatgccaagatgtgaatgaatgtgctgaggaaggttactgcagccaaggctgt
accaacagtgaaggtggcttccagtgctggtgtgagcaaggctatgagctgcgccctgac
aagcgtagctgcaaagctctagggccagagccagtgctgctctttgccaatcgaattgat
atccggcaagtgttgcctcatcgctcagagtatacactgctcctgaacaacttggaaaat
gccattgcccttgacttccaccacagcaaggagttggtattttggtctgatgtcaccctg
gatcgcatcatgagggctaatctgaatggtagcaatgtggaagaagtggtttctacaggt
ctggagagcccaggtggacttgctattgactggatacatgacaaattatactggacagac
tctggaacatctcgaattgaagtagcgaacttggatggtactcacaggaaggtgcttttg
tggcagaacctggagaaaccccgggcgattgccctccatcctatggagggcacaatctat
tggactgactggggcaacactccccgcattgagtattccaacatggatggctctaatcgg
cgcatcattgcggatacacacctattctggcccaacggactgaccattgattatgcaggg
catcggatgtactgggtggatgccaaacaccatgtcatcgagagggctgaccttgatgga
cagaataggaaagctgttattagccaaggccttccacacccatttgctatcaccgtgttt
gaggacagtttgtactggacggactggcacaccaagagcattaacagtgccaacaaattc
acaggcaagaaccaggaaatcatccgaaacaaactccacttccctatggacattcacacg
ctgcatcctcagcgtcagccagcagcagggagaaaccgctgtggggccaacaacgggggc
tgtactcacctgtgcctgccgagcagcaaggattatacctgcgcctgccccactggcttc
cgcaagaccagcagccatgcctgcgctcagagtcttgacaagttcctgctttttgcccga
aggatggacatccgtcggatcagctttgacacagatgacctgtcagatgatgtcatcccc
cttgctgatgtgcgcagcgcagtggctctggactgggactcaaaggatgactatgtctac
tggacagatgttagcaccgattcaatcagccgagcaaaatgggatggatcaggccaggag
gttgtggtggataccagcctggaaagtccagctggactggcaattgactgggtcaccaac
aaactgtactggactgatgcaggaacagatcgaatagaggtctccaacacagatggaacc
atgaggactgttctgatctgggagaacctagacagacctagagatatcgtagtggaccct
gttgaaggattcatgtactggactgactggggagccaacccaaaaattgagcgcgctggt
atggatgcttcaaatcgcttggtgatcatttcctccaacttgacgtggcctaatggcttg
gccattgactatgagtcgcagcgcttgtactgggcagatgcaggcatgaagaccattgaa
tacgccagtctggatggcagcaacaggaaggtgctgattgggagcaatctgcctcacccg
tttggacttactctttatggcgagagaatctactggacagactggcaggccaaaagcatc
cagagcgcagatagaaggactgggcaggcacgggaaacgcttcaggacaatctggagaat
cttatggatattcatgttttccaccggcataggccaccagtacgtacaccatgtgaagtt
aataatggaggctgcagtcacctgtgccttctggcacctcttccaaaaggttatagctgt
acctgtcccactgggatcaacctacagtctgatggcaagacgtgttccactggaatgacc
agctttctgatctttgccagaaggactgacatacggatggtctctctggatattccctac
tttgcggatgtcgttgtttcagtcaatgtcaccatgaaaaacaccattgcaattggagtg
gatcctcatgaaggaaaggtttactggtcagacagcacactgcgaaaaataagccgggct
gcccttgatggctccaaatttgaggacatcatcaccacaggtctgttgactacagatggg
ctggccgtggatgctattggcagaaagatatattggacagatacaggaacaaaccgtatt
gaagtgggcaatcttgatggctctatgaggaaagtcttggtctggcagaatctggacagc
ccacgggcaatagccttataccatgaaatgggctatatgtactggacagattggggtgag
aacgccaagctggaacgctctgggatggatggctcaggacgcgtggttttgatcagcaac
aacctgggctggcccaacggactggcagtggataaggctgggtcccagctgctctgggct
gatgcacacactgagcgtattgaggctgcagatctcaatggtgctaaccgccgcaccctg
ctgtccccagtgcaacacccctatggcctcactttgctggactcttacatctattggacc
gactggcaaactcgcagcattcacagggctgacaaggacagtggtgccaatgtcatcctg
gtgagggcaaacctgcctggcctcatggacattcaagctgttgatagggcacggccccta
ggctttaataaatgtggagttcgtaatggtggctgctctcacctttgcttgcctcacccc
actggattctcctgtgcctgccccactggcatccagctgaaacgagatgagcagacttgt
gactcttctccagagacatacctgcttttctctagccgtgcttccattcgtcgtatctcg
ctggataccagtgaccacacagatgtgcacatccccgtccctgagctgaacaatgtcatt
tctctggattatgacagtgtggatggcaagatttactacacagatgtttttcttgatgtc
atcaggcgatctgatctgaatggcagcaacatggaaactgttattggtcagggcctgaag
actacagatggtctggcagtggactgggttgctaggaacctctactggacagacacagga
cgcaatactgttgaagtggctagattggatgggagctccaggaaagtgctaatcaacaac
agtctggatgagccccgagccattgctgtctttcccaagaaggggtacctcttctggaca
gattggggtcatattgctaaaattgaacgggcaaacttggatggctctgaacgtaaaatc
ctgatcaacactgacctaggatggccaaatggtttgaccttggattacgacaccagaagg
atatactgggtggatgcgcatcttgatcgcatagagagttgtgatctcaatgggaagcta
cggcaagtgctggtcagccaggtgtcacatccttttgctttgacacagcaggacagatgg
atatattggactgactggcaaaccaagtctatacagagagtggacaaatactctggacgg
aacaaagagacggtcctggccaatgttgaggggctgatggatataattgtggtttcccct
caaagacagacaggtaccaatgcttgtggagtgaacaatggaggctgcactcacctctgc
tttgccagagcttctgactttgtctgtgcatgcccagatgaaccggatgggcgaccctgt
tctactgttcctggtgtggtgccctttggtcccgaaatcaccagtgagagaagtcagaca
ccacctggcagaataggtacctcaacaaccaagcctcttacatctctggaagaagaggaa
ggaaactgctctgacaaagacgccaggcgaggcttgtgtactcatgccaatgaggcagtg
ttggcaacaatgggtgagggactgcatgttagctacatcattggaggtcttctcagcatc
ttgttcattttgctgcttattgcttctttaatcatatataggcataataaatccaagttc
acagaccctggcctagggaacctaacctacagtaatccctcgtatcggacatctacccag
gaggtgaagattgaaacaattcccaagccgacaatgtacaaccagttatgctataaaaaa
gagactggtcctgatcacagctacaccaaggagaagataaagattgtggaggggatatgc
cttttatccagtgatgattcagagtgggatgaccttaagcaaattcggagctctcgagga
gggatcctccgggaccatgtttgcatgaagacagacacagtctctatccaggctagttct
ggttcactggatgacactgaaactgagcagctgctacaggaagaacagtctgagtgcagc
agtgttaacacagcagcggccactcctgaacggcgtggctcactcccagacacaggctgg
aaacaccaacgcaagccctccactgagagcgaggtctaa
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integrated database retrieval system
