Tympanuchus pallidicinctus (lesser prairie-chicken): 128086311
Help
Entry
128086311 CDS
T08967
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04137
Mitophagy - animal
tpai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128086311 (AMBRA1)
04137 Mitophagy - animal
128086311 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128086311 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128086311 (AMBRA1)
Membrane trafficking [BR:
tpai04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
128086311 (AMBRA1)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
128086311 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
128086311
NCBI-ProteinID:
XP_052550735
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTEMPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNSVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSARLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SVAQEEQGILNRPSAFSTVQSSAAGNTLRNLSLGPTRRSLSGPLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEADSGSGTGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIAGEPSQSQQAQEML
NNNIEPDRPGPSHQQAPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYTPG
QVQSTFEGVPPNTSQVQPAERTEGRAPASSRLQLGSSSTPQEERTVGVVFNQETGHWERV
YSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDP
ARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSSSTSENPSPSVEGNDLEFE
DFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNR
VLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDI
SADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVM
VGLASRRILLHPSTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARWL
PEPGLGLAYGTNKGDLVICRPEALNSGVEYHWDQQNENVFTVHSSSRSTERPGTSRATWR
TDRDMGLMNAIGLQPRNPPTSVTSQGTQTLAPQLQNAETQTEREVQEQESTSAGTGEGEG
PEYGTSGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGAE
STGAEGTSAHQSTSQQLAAELEGRILSESMQLSEHGLSPRTSSGESEGQDTGDLDLPEQV
QSSMDTEGPIEYSDLTNNNHLPDSTNFYSNDSTSGESRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtaccagagaagaatgcggtccgcatcctgtggggtagggaacgaggtacc
caggcactgggagctcagcggctcctgcaggagttggtggaggataaaactcgatggatg
aaatgggagggcaagaaagttgagttaccagacagtccacgctccaccttcttgctggcg
tttagtccagacaggaccctaatggcttccacgcatgtgaaccacaacatctacatcaca
gaggtgaaaacgggcaagtgtgttcattccttggttggacatcgccgcactccctggtgt
gtgacctttcatcccaccatcccaggcctcattgcttcaggatgcctagatggggaggtt
agaatttgggatctacatggtggaagtgaaagctggttcacagatagcaacaatgccatt
gcatcgctcgcttttcatcctacggctcaactcttgctgattgcaacggccaatgagata
catttctgggactggagccgtcgagagccttttgcagtggtgaagacagccagcgaaatg
gagcgggtccggctagtacggtttgatcccttgggacactacttgctcacagcaattgtt
aacccttccaaccagcagagtgacgaggaagtggaaatctccgtggacagcacagagatg
ccgcattatcgccagcgcgctatccttccctctcaacctgtgaggcgcacacctctcctc
cacaacttcctgcatatgttgtcctcccgctcctctggcatacaggtgggagagcaaaac
agtgttcaagactctgctaccccatcccctccaccgcctccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtttataacaggctccgggagcgtgtcagctac
cccacagcagagtgctgtcagcacttggggatgttgtgcctttgcagccgatgctctagt
gcaagacttccgtcttctctgttcccacaccaggaaaacgcaccctccacgtcttctggg
gccactggcacgtccttctcctctgtgcagacagagccttaccagcccccagagcaggca
tctgtagcacaggaggagcaggggatacttaacaggccctctgctttcagcacagttcag
agcagcgctgctggcaacaccctgcgcaaccttagcctggggcccacgcggcggtccctg
agcgggcccttggcaggccaccagtcccgctaccagcagtctgcaagagagatggcttca
ggcttgggcgggtctgactggtccaggacagtgctgaacatgagctccaggtcagagctg
gaagccatgcctccccctaggaccagtgcctcctctgtgagcttgctgtcggtgctgcgg
cagcaggagggaggttcccaggcatcagtctatacctctgcaacagaagggagaggcttc
ctagccccaggggctgaggcggacagtggtagtggcactggcccgagcaatccggccagc
atccgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccgacttcag
gagttagatcagggaattgctggggagcccagccagtcgcagcaggctcaagaaatgctc
aacaacaacattgagcctgatcggcctggtccctcccatcagcaggctccacacagcagt
gaaaacaattccaatttatcccggggtcacctgaaccgctgtcgcgcttgtcataacctg
ctgacctttaacaatgacacgctgcgctgggaaagaagcacgcctagctacacaccaggg
caggtccaaagcacatttgagggtgtgcctccaaataccagccaggtgcagcctgcagag
agaaccgagggcagagctcctgcctctagcaggctgcagctgggcagctcttccaccccg
caggaggagaggaccgtgggagtggtctttaaccaggagacggggcactgggagagagtt
tacagccagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaa
atgcctgaggaaagctcagaggaggattcactcaggaggaggttgctggagtcttccctc
atttcgttatctcgctatgatggagcagggtcccgggaacatccaatctatccagatcca
gccaggttatctcctgctgcatattatgctcagaggatgattcagtatctttctcggagg
gacagtattcggcagcgatccatgagataccaacagaaccgtctccgctcttcctcctcc
tcttcttccacttcagagaacccaagcccatctgtagaaggaaatgacctggaatttgaa
gattttgaggacaacggagatcgatccaggcaccgagctccccgtaacgcccgcatgtct
gcgccgtcgctggggcgctttgtcccaagacgcttcttgctgccagagtacttgccttat
gctggaattttccatgaaaggggacagcctggcttggccactcattcttctgtcaatagg
gttttggcaggtgctgtgattggagacggacagtcagctgtggccagcaacattgctaac
acaacctaccggctccagtggtgggacttcacaaagtttgacctgccagaaatcagcaat
gcgtccgtgaacgtgcttgttcaaaactgcaagatttacaatgatgctagctgtgatata
tctgcagatgggcagctactggcagccttcattcccagcagccagcgaggctttcccgat
gaaggaatattggctgtgtattctctggcaccccataacttgggcgagatgctttacaca
aaacgatttgggcctaatgccatttctgtgagcctgtctccaatgggcagatatgtaatg
gtgggactggcttcccgacgtatcctattgcacccttccacagaacacatggttgctcaa
gtcttcaggttgcaacagccccatggtggagaaacctctatgaggagagttttcaacgtt
ctgtacccaatgcctgctgaccagagaagacatgtcagcataaactctgctcgctggcta
cctgaaccaggcctaggattggcatatggcaccaacaaaggggatctggtgatttgcaga
ccagaggccttaaactctggagttgaataccactgggaccagcagaatgagaatgtcttc
actgtgcattccagcagcaggagcactgagaggcctggaaccagcagagccacatggagg
acagatagggacatgggcctgatgaatgccataggtctacaaccacgaaacccccctacc
tctgtgacttcacagggtacccagaccttggcgcctcagctgcaaaatgccgagactcag
acagagagggaggtacaggagcaggaatccacctctgcagggactggggaaggtgaaggt
ccagaatatgggaccagtggggaggatgccctgagcaggatacaaaggctgatggcagaa
ggaggcatgactgctgtggtccagcgggagcagagcaccaccatggcgtccatgggtggc
tttggcaacaacatcatcgtgagtcaccggatccaccgcagctctcagactggtgcagag
tccactggcgctgagggcacatcagcacatcagtccacctcacagcagctggcagctgag
ctggagggacggatcctttcagagtctatgcagctgtcggagcatggcctgagcccgcgg
acatcctctggcgagagtgaaggacaagacactggtgatctggacctgccggagcaggtc
cagtcctccatggacactgagggaccaatcgaatacagtgacctaactaataataaccat
cttcctgacagtaccaacttctatagtaatgacagcaccagtggggagtcacggaacagg
tag
DBGET
integrated database retrieval system
