Tympanuchus pallidicinctus (lesser prairie-chicken): 128086315
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Entry
128086315 CDS
T08967
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04136
Autophagy - other
tpai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128086315 (ATG13)
04136 Autophagy - other
128086315 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128086315 (ATG13)
03029 Mitochondrial biogenesis [BR:
tpai03029
]
128086315 (ATG13)
Membrane trafficking [BR:
tpai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128086315 (ATG13)
Atg1 complex
128086315 (ATG13)
Mitochondrial biogenesis [BR:
tpai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128086315 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
128086315
NCBI-ProteinID:
XP_052550750
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVTDTLKVPVMGLAFSHQLSSSR
LSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLICPGKEGGVPPVPSQPAHGTQADQERT
CTPLDGAHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMA
NLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSAGNTHDDFVMID
FKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKE
FDAFVETLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcgcaggacaggaaggacctggacaagttcatcaaatttttt
gctctgaagacggtacaagtaattgtccaggcccgactcggagagaagatctgtacccga
tcgtcgtcctccccaacaggctccgactggttcaatttagccatcaaagatataccagag
gttactcatgaagcaaagaaagccttggcaggacagctgcctgctgttggacggtctatg
tgcgtggagatttctcttaaaacctcagagggggattccatggagctagaaatttggtgt
ctagaaatgaatgagaagtgtgacaaagaaatcaaagtctcatacacagtatacaacaga
ctgtctctactactgaagtctttgcttgctataaccagggtaactccagcctacagactc
tcaaggaagcaaggccatgaatatgtgatattgtacaggatatattttggtgaagtgcaa
ctgagcggcctgggagaaggttttcaaacagttcgtgttgggacagtaggaaccccagtg
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgcccctat
cccagctcttcgcccatgcatccctgcaattacagagctggtgaggacaatggtgcagta
tacccctcagtagaagattcccaagaagtgtgtactacatcattctccacctctcctcca
tctcagtgtgtttttactgtcacaaaggcacattttcagacccctcctcctgtggtgacg
gacaccttgaaggtcccagtgatggggctggccttttcacatcaactttccagctctcgt
ctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatcctgtactc
tttgctggtggcttgaatgctgcacaccctcaccagttgatctgtccaggcaaagagggg
ggagttcccccagttcctagccagccagcacatggcactcaagctgaccaagagaggaca
tgcaccccactagatggagcgcactactcagcagctactccttctagtagcgaggacacg
gaaacagtatcaaacagcagtgaagggaagtgtggctccccacatgaccttttggagacc
atctttatccggaaggtgggagcttttgtcaacaaacctattaaccaggtgaccatggcc
aacttagacattccttttgctatgtttgctcccaagaatgttgagctggaagataacgac
cccatggtcaatcctcctgattccccagaaactgaatctcctctacaaggcagcttacac
tcagagggctccagtggcagcagcgcagggaacacccatgatgactttgttatgattgat
tttaaaccagcattttctaaagatgacattcttccaatggacctggggacgttttaccgt
gagtttcagaacccccctcaactcagcagcctctccattgacataggagctcagtccatg
gcagaggatttggactcactaccagagaagctggcagtccatgagaaaaatgtcaaagag
tttgatgcctttgtagaaaccttgcagtga
DBGET
integrated database retrieval system
