Tympanuchus pallidicinctus (lesser prairie-chicken): 128086340
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Entry
128086340 CDS
T08967
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128086340 (SSRP1)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128086340 (SSRP1)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
128086340 (SSRP1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
128086340 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
128086340
NCBI-ProteinID:
XP_052550853
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRGEKKPAKKAKIVKDRKPRKKQVESKKGK
DPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
AKRDYEKAMKEYSVGNKSESSKMERSKKKKKKQEKQMKGKMEKKGAASKSSSSTKSSAKN
MSESFKSKEFVSSDESSSAESKKEDSDDERGASPAQSSEDSASGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacactggagttcaacgagatctaccaggaggtgaagggatccatgaatgat
ggccggctgcggctgagccgccagggcgtcatcttcaagaacagcaagacggggaaggtg
gacaacatccaggcctcagagttggcagagggtgtgtggcggcgtgtggcactcggtcac
ggcctcaagcttctcaccaagaacggccatgtctacaaatacgatggtttccgggaatcg
gagtttgataagctctcagatttcttcaaggcacactatcgtctggagctggccgagaag
gacctgtgtgtgaagggttggaactggggcacagtgaggttcggagggcagcttctctcc
tttgacatcggggagcagccggtgtttgagatccccctcagcaatgtctcccagtgcacg
acgggcaagaacgaagtgacgctggagttccaccagaatgacgacgctgaggtctcactc
atggaggttcgcttctacgtgccccctacccaggaggatggtgttgaccctgtggaggcc
tttgctcagaatgtcctctccaaggcggatgtgatccaggcaactggtgatgccatctgc
atcttccgggagctgcagtgtttgacgcctcgtgggcgatacgacatccgcatctacccc
accttcctgcacctccatggcaaaacctttgactacaaaatcccctatactaccgtgctg
cgcctcttcctgctcccacacaaggaccaacggcagatgttctttgtgattagcctggat
ccaccgataaagcagggccagacccgctaccacttccttatcctgcttttctccaaggat
gaagacatctcactgaccctcaacatgaatgaggaagaggtggagaaacgcttcgagggg
cggctcactaagaacatgtcaggctccctctatgagatggtcagccgagttatgaaggca
ctggtgaaccgcaagatcactgtgcctggcaacttccagggacactctggagcccagtgc
atcacctgctcctacaaggccagctcaggacttctctacccactggagcgtggtttcatc
tatgttcacaagccgccagtgcacatccgctttgatgagatctccttcgtcaactttgcc
cgtgggaccaccaccacccgctccttcgactttgagatcgagaccaagcagggcacacag
tacaccttcagcagtatagagagggaggagtacgggaagctctttgattttgtcaatgcc
aagaagctgaacatcaagaaccgaggcctcaaggagggtatgaagcagagctacgatgaa
tatgctgactctgatgaggaccagcacgacgcctacctggagaggatgaaggaggagggc
aagatccgggaggagaacgccaatgatagcagcgatgggtctggagaggagacagatgag
tcattcaaccccggggaagaggatgatgatgtggctgaagagtttgacagcaatgcctcg
gccagctcctccagtggggacggtgacagtgaccgaggtgagaagaagccagccaagaag
gccaagatagtcaaagaccgcaagccccgcaagaagcaggtggagagcaagaaaggcaaa
gaccccaatgctcccaagagacccatgtcggcttacatgctttggctgaatgccaaccga
gagaagatcaagtcagaccatcctggtatcagcatcacagacctgtccaagaaggctggg
gagctctggaaagccatgtctaaggagaagaaagaggaatgggatcgcaaggcagaagat
gccaagagggattatgagaaggccatgaaagagtacagcgtgggcaacaagtcagagagc
tccaagatggagaggtctaaaaagaagaagaagaagcaggagaaacagatgaaagggaaa
atggagaagaagggtgctgcctccaagtcttcgtcctccaccaagtcctctgccaagaat
atgagcgagagcttcaagagcaaggaatttgtctccagcgatgagagctcctctgcagag
agcaagaaggaggactcagacgatgagagaggcgccagcccggcccaaagctcagaggat
tctgcgtctggctcggattag
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integrated database retrieval system
