Tympanuchus pallidicinctus (lesser prairie-chicken): 128086348
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Entry
128086348 CDS
T08967
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128086348 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128086348 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tpai00536
]
128086348 (SHH)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C46: hedgehog family
128086348 (SHH)
Glycosaminoglycan binding proteins [BR:
tpai00536
]
Heparan sulfate / Heparin
Morphogens
128086348 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
128086348
NCBI-ProteinID:
XP_052550864
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEHGGTKLVKDLSPGDRVLAADADGRLLYSD
FLTFLDREDGSRKLFYVIETRQPRARLLLTAAHLLFVAPQHNQSEATGLTGGQALFASNV
KPGQRVYVLGEGGRQLQPASVHSVSLQEEASGAYAPLTAQGTILINRVLASCYAVIEEHS
WAHWAFAPFRLAQGLLAALCPDGAIPTAATTTTGIHWYSRLLYRIGSWVLDGDALHPLGM
VASAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggaggcaccccaaa
aagctgaccccgttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgccctggcgatttcggtgatgaaccagtgg
cccggggtgaagctgcgggtgaccgagggctgggacgaggacggccaccactccgaggaa
tcgctgcactacgagggtcgcgccgtggacatcaccacgtcggatcgggaccgcagcaag
tacgggatgctggcccgcctcgccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcagccaaatcaggaggc
tgcttccccggttcagccacggtgcacctggagcacggcggcaccaagctggtgaaggac
ctgagccctggagaccgcgtgctggctgctgacgcagatggccggctgctctacagcgac
ttcctcaccttcctcgaccgagaggacggctcccgaaagctcttctacgtcatcgagacg
cggcagccccgagcccggctgctgctgactgcagcccacctgctctttgtggccccccag
cacaaccagtcggaggccacagggctcaccggcggccaggcgctcttcgccagcaacgtg
aagcctggccaacgtgtctacgtgctgggcgagggcgggcggcagctgcagccggcgtcc
gtccacagcgtctcgttgcaggaggaggcatcgggagcctatgccccgctcaccgcccaa
ggcaccatcctcatcaaccgggtgctggcctcctgctacgccgtcattgaggagcacagt
tgggcccattgggccttcgcaccattccgcttggctcaggggctgctggccgccctctgc
ccagatggggccatccctacggccgccaccaccaccaccggcatccattggtactcacgg
ctcctctaccgcatcggcagctgggtgctggatggtgacgcgctgcacccgctgggcatg
gtggcatcggccagctga
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integrated database retrieval system
