Tympanuchus pallidicinctus (lesser prairie-chicken): 128086356
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Entry
128086356 CDS
T08967
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04150
mTOR signaling pathway
tpai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128086356 (LRP5)
04150 mTOR signaling pathway
128086356 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128086356 (LRP5)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128086356 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
Vgb_lyase
DUF5050
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128086356
NCBI-ProteinID:
XP_052550874
LinkDB
All DBs
Position
Unknown
AA seq
1617 aa
AA seq
DB search
MEAAPPLLLLLRLLAASVLRCEPGSAGASPFLLFANRRDVRLVDAGGTKLESTVVVSGLE
DAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGKKLY
WTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDS
STRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFAL
TLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPCEENN
GGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKSGAEEVLLLARRTDLRRISLDMPDFT
DIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSGAQTLVTTEINHPDGIAV
DWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGESPK
IECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTDKIEVINVDGTMRKTLLED
KLPHIFGFTLLGDYIYWTDWQRRSIERVHKIRASRDIIIDQLPDLMGLKATSVTKVFGTN
PCAENNGGCSHLCFFTPQETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISLETN
NNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYPEGM
AVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEWGGK
PRIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREIIAD
DLPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSRQDGL
NDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPTSFLLFSQKSAISRMIPDD
QQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSSPNQSQN
PEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLNGESIGMVLRGEHDKPRAIVVNAERGYM
YFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIESCDL
SGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTNGYKRTRIQGRIAHLTGI
HAVEELDMEEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPPTCSP
DQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSAAQFQCEKGQCIDAHLRCNGEI
DCQDKSDEVDCDTICLLNQFRCASGQCILLKQQCDSFPDCIDGSDELMCEKSKPSSDEPQ
PHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNFIAPG
SSQHGTFTGKDGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQIL
NPPPSPATDRSLYNAEMFYSSNIPSTTRSYRPYLIRGTAPPTTPCSTDVCDSDYTTSRWK
ANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccgccgctcctgctgctgctgcggctcctggccgcctcggtgctgcgc
tgcgagccgggctcggccggggcatctcccttcctgctttttgccaaccgtcgggatgtt
cgactcgtggatgctggaggcacaaagctggagtccactgtggtggtcagtggtttagag
gatgctgctgcggttgacttccagtattcgcaaggcatcgttttctggacagatgtgagc
gaagaagccatcaagcaaacttatattaaccaaactgggaatgtggtgcagaatgtcatc
atttctggtctggtttccccggatggcctggcatgtgattggattgggaaaaaactttac
tggacagattcagaaaccaataggatagaagtcgctaatctcaatggaacatctagaaaa
gtcctcttctggcaagaccttgatcagcccagggcaatagctttggatccagctcatgga
tacatgtattggactgactggggcgaaacgcccagaatagaacgggcaggaatggacagc
agcacgcggaaaataattgttgattcagatatctattggccaaatggactcacaatagat
cttgatgagcagaaactttactgggctgatgcaaaattgagtttcattcatagagcaaat
ctggatggctcctttaggcaaaaggttgttgaaggaagtcttactcatccatttgcgttg
acactgtctggggacactttgtattggacagactggcagacacgttccattcatgcctgt
aacaaacggacgggagagaagaggagagaaatattatcagctctttattcacccatggac
atccaggtcttaagcccagaccggcagccctactttcacactccatgtgaagaaaacaat
ggtggttgctcccatctgtgcctgctatcaccaagagaccccttctacagctgtgcctgt
cccactggtgtgcagctagaagatgatggcaggacgtgcaaatcaggtgctgaagaagtg
ttgctgcttgctaggaggactgacttgagaaggatttccttggacatgccagacttcact
gacattattctgcagatagacaatatcagacatgcaattgccatagactatgatcctgtg
gaaggctacatctactggactgatgatgatgttcgggcaattcgtcgggcgtaccttgat
ggctcaggagcacagactctggtaaccacagaaatcaaccatccagatggaattgctgtg
gactgggtggcaaggaatctgtactggactgatactggaacagaccgcattgaagtgacc
cgtttgaatgggacatcgagaaagatccttatatctgaaaatctagatgaacctcgtgca
atcgtgctcaatcctgtgatgggctacatgtattggacagactggggtgaaagtccaaag
atagaatgtgcttatttggatggatcagagaggagagttctggtgaatacatccctaggt
tggcctaacggcttggcactggatcttgaagaggacaaactttactggggagatgcaaaa
acagataaaattgaggtcataaatgttgatggaacgatgaggaaaaccctcctagaagat
aaacttccgcatatatttgggttcacactgctgggtgattacatctactggactgactgg
cagaggcgaagcattgaaagagttcacaagataagggctagcagggacatcattattgat
cagctgccagacttgatgggccttaaagcaacaagtgttaccaaagtttttgggactaat
ccatgtgcagagaacaacggaggctgcagccatctgtgtttctttacaccccaggagacc
aggtgtgcctgtcccattggccttgagctgttgagtgacatgaagacttgcatcattcct
gaagccttcttagttttcacaagcagagcagcaattcataggatttcccttgaaaccaat
aataatgatgttgctattcctcttactggagtcaaggaggcatctgctctggattttgat
gtttctgataacagaatctattggactgatgttagtttgaagaccataagtcgagctttc
atgaatgggagctctgttgaacacgtgattgaatttgggctagattaccctgagggaatg
gctgtagactggatgggaaagaacctctactgggcagatactggaactaatcgaattgag
gtagcccgcctggatggacagtatagacaggtccttgtgtggaaggacttggacaaccca
aggtctttggctcttgatcctaccaaagggtacatgtactggacagaatggggaggtaag
cctaggatcgttcgagcatacatggatggaacgaacagcatcactttggtggataaagtg
ggtcgtgccaatgacctcacaattgattatgccgaccaacggctgtattggactgactta
gacaccagcatgattgaatcgtcaaatatgctaggacaagaacgagaaatcatagcagat
gatctacctcatccatttgggttgacccagtacagtgactacatctactggacagactgg
aatcttcacagtatagaaagagcagacaagaccaatgggaagaacaggacgcttattcag
ggccatctggattttgtgatggatattttggtcttccattcttcacgtcaggatggctta
aatgattgtgtgcaaaataatggccattgtggtcacctgtgccttgccataccaaatgga
tttagatgtggctgtgctgcgcactataccttggatcccaacagcaggaactgcagttct
ccaaccagtttcctgttgttcagccagaaatctgccatcagccgaatgatacctgacgat
cagcaaagtccagatatcatcctgcctatgcatggtctaaggaacgtgaaggctattgat
tatgatcccttagataaattgatttactgggtagatgggcgtcagaatattataaaaaga
gccaaagatgatggcactcagccttttactgtcatgagctctccaaaccaaagccagaac
ccagagaagcagccacatgacctcagcattgatatatacagccataccttgtactggacc
tgtgaggccacaaactccgtcaacgttcacaggctgaacggcgagtcaatagggatggtg
ctgcgaggcgagcacgacaagcccagagccatcgtagtgaatgcagagcgggggtacatg
tatttcaccaacatgcaagagcgagctcccaagattgagcgtgcagccctagatggcaca
gagagggaagtgcttttcacgactgggttgatccgaccagtagcactggtgattgacaac
aaactgggaaagcttttctgggtggacgcagatctgaagcgcatcgaaagctgtgacctg
tcaggtgctaaccgtgtgactctggaggactccaacatccttcagccaatgggactgact
gtgctggggaatcacctgtactggattgatcggcagcagcagatgattgagagagtggag
aaaactaatgggtacaaaaggactagaattcaaggccgaattgctcacctaacaggcatt
catgctgtggaggaacttgatatggaggaattctctgcacatccgtgctcccgtgacaat
ggtgggtgctcacacatctgcattgccaaaggggatgggactccaaggtgttcatgccca
gagcaccttgtgctcctgcagaatctcttaacatgtggagaacctccaacttgctcccca
gaccagtttacctgtgcaactggagagattgactgtatcccaatggcatggcggtgtgat
gggttccctgagtgtgatgaccagagcgatgaggatagttgtccaatatgctctgcagct
cagttccagtgtgagaaaggacaatgtattgatgcgcacctgaggtgtaatggagaaatt
gactgccaagataaatctgatgaagtggattgtgatacaatttgtctgctcaatcagttc
cgatgtgccagtggccagtgcatccttctgaagcaacagtgtgactcctttccagattgc
atcgacggctcagatgagctcatgtgtgaaaaatcaaagccatcctcggatgaacctcag
ccccacagcagtgccatcggtcccgtcattggaataatactttccctttttgtcatggga
ggaatgtactttgtttgccagcgagtggtgtgtcagcgctacgctgggcccaacagcccc
tttccacatgagtatgtcagtggcacgcctcacgtccctcttaatttcattgctcctgga
agttctcagcatggcacttttactggtaaggatggcatctcttgtggaaagtctatgatt
agctccatgagcctcatgggagggagcagtggtgcccccttatatgacagaaaccatgtt
actggagcctcttctagtagctcatccagcactaaagccactttctacccacagatcttg
aacccccctccatccccagctactgatcgctccctgtacaacgcagagatgttttattct
tcaaacattccttcaaccacaagatcttacaggccttaccttatacgagggacagctcca
cccacaaccccgtgcagcacagatgtttgtgacagtgactatactactagtcgatggaaa
gccaacaaatactatatagatttaaattcagactcagacccttacccccctccacccacg
cctcgcagccagtacatgtcggcagaagaaagttgccctccatctcctgccacagaacga
agctactttcacctctacccacctccaccctctccttgtacagactcctcatga
DBGET
integrated database retrieval system
