Tympanuchus pallidicinctus (lesser prairie-chicken): 128086380
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Entry
128086380 CDS
T08967
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128086380 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128086380 (ABCB1)
04147 Exosome [BR:
tpai04147
]
128086380 (ABCB1)
04090 CD molecules [BR:
tpai04090
]
128086380 (ABCB1)
Enzymes [BR:
tpai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
128086380 (ABCB1)
Transporters [BR:
tpai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
128086380 (ABCB1)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128086380 (ABCB1)
CD molecules [BR:
tpai04090
]
Proteins
128086380 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
AAA_5
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_15
G-alpha
AAA_19
nSTAND1
DUF87
Motif
Other DBs
NCBI-GeneID:
128086380
NCBI-ProteinID:
XP_052550927
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MHPEDEKQKYTVNGNTYEIATSIRDQDPEDKKKKKKKKGEKPKMVSPLALFRYSTCTDKL
LMIFGSLLAIAHGSSLPIAMIIFGDMTDSFVTSGDTNFTGNLSTLNSSSEMLNKLEEDMT
RYAYYYTAIGAAVLVAAYVQTSFWTLAAGRQVKKIRENFFHAIMKQEIGWFDVNDAGELN
TRLIDDVSKINEGIGDKIGLLIQSETTFISGFVVGLVRGWKLTLVILAVSPVLGLSAAIW
AKILTAFTDREQAAYAKAGAVAEEVLGAIRTVVAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITSNISIGAAFLLIYASYALAFWYGTTLVLTDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAIANARGAAYAIFKIIDNEPQIDSYSNAGHKPDHIKGNLEFQNVFFNYPSRPDVEILKG
LNLKINCGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTITIDGQDLKSLNVRYLREIIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKAAKEANAYDFIMKLPKKFETVVGERGAQMS
GGQKQRIAIARALVRNPKILLLDEATSALDNESESVVQAALDKAREGRTTVVVAHRLSTV
RNADLIAVFDSGVITEQGNHSQLIETKGIYYKLVNMQAIETEDPSSEKDENTVSIKRNGS
PSNLDESFKTGLRRGSTRRSMKKPNDTDGKGGSPAEELPPVSFLKVMKLNKKEWPYFVAG
TLCSVVNGALQPAFAVIFSEIIGIFSETDENVLREKSNLYSLLFLAIGIVSFFTFFVQGF
AFGKAGEILTMRLRFMAFKAMLRQDMAWFDDPKNSTGALTTRLANDASQVKGATGVRLAL
IAQNISNLGTGIIISLVYGWQLTLLLLAVVPIIAVAGMIEMKMLAGHAKKDKIELEAAGK
IATEAIENIRTVASLTREKRFELMYGEHLYVPYRNSVKKAHIFGFCFALSQAMMFFTYAG
CFRFGAYLVVNGHMEYKSVFLVFSAVVFGAMALGQTSSFAPDYAKAKISAAHLFVLFDRV
PSIDSYCEDGEKPVTFEGNTRIKDVKFNYPNRPEVKILQGLNLKVEKGETLALVGSSGCG
KSTVVQLLERFYDPLSGEIEFDDKGAKTLNIQWLRSHIGIVSQEPILFDFTIAENIAYGD
NTREVSHEEIISAAKAANIHSFIDSLPEKYNTRVGDKGTQLSGGQKQRIAIARALVRKPQ
ILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADKIAVIQNGKIIEQG
THQQLLAEKGFYYSLVNVQSGSCNM
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctgaagatgaaaagcagaagtatactgtcaatggaaatacatatgagatcgct
acctccatccgggatcaagatccagaagacaaaaagaagaaaaagaagaagaaaggggaa
aagcctaaaatggtcagcccgttagcactgtttcgatactccacctgcacagacaaatta
ttaatgatatttggctctctcttggcaatagcccatggaagcagtctccctatagcaatg
ataatttttggtgacatgactgatagttttgttacttctggtgacacaaattttacagga
aacctttctacactgaattcctcttcagagatgcttaacaagctggaagaagatatgaca
agatatgcatactactatactgcaataggagctgctgttcttgttgctgcttatgtccag
acatcattctggacactggcagcaggccgacaagttaaaaaaattagagaaaattttttt
cacgcaattatgaaacaggagattggatggtttgatgtaaatgatgcaggagaacttaac
actcgtctcatagatgatgtcagcaagattaatgaaggaataggtgataaaattggattg
cttattcagtcagaaacaacatttatatcaggatttgttgttggtcttgtaagaggatgg
aaattaacccttgtaatacttgcagtcagtcctgtcctaggactttcagcagccatctgg
gcaaagattctcactgcattcaccgatagagagcaagctgcatatgcaaaagcaggagct
gttgcagaggaagttctgggtgcaatccgtactgtagtagcttttggagggcaagaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacgcattggaataagaaaggct
attacatctaatatttctattggtgctgctttcttactgatatatgcatcatatgcactg
gccttctggtatggaactaccttggtcttaaccgatgattacactattggcaaggttctt
acagtctttttctctgtactgattggagctttcagtattggacaaactgctccaagcata
gaggcaattgctaatgcaagaggagcagcctatgcaatctttaagatcattgacaatgaa
cctcaaattgacagttattcaaatgcaggacacaaaccagaccacattaaagggaacttg
gaattccaaaatgttttcttcaattacccatccagaccagatgttgagatactgaaaggc
ttgaatctcaagattaattgtggccagacagtagccctggttggtggcagcggctgtgga
aaaagtacaactgttcagctcatccagaggttttacgaccccaaggaaggcacgattacc
attgatgggcaggatctgaagagcctgaatgtaagatatctgcgggagattattggtgtg
gtgaaccaggagcccgtgctgtttgctacaactattgcagaaaatattcgttatggccgc
gaggatgtcaccatggaagaaattgaaaaagctgccaaggaagctaatgcttatgatttc
atcatgaagctccccaagaagtttgaaactgtggttggagaaagaggggcacagatgagt
ggagggcagaagcagcgaatagccattgcccgtgctctggttcgcaatcctaaaattctt
ctgcttgatgaggcaacctcagctttggataatgagagtgaatccgttgtgcaggcagcg
ctggataaggcaagagaaggacggaccacagttgtagtagctcaccgtctgtcaactgtt
cgaaacgcagatcttatcgctgtgtttgacagtggagttattacagaacaaggaaatcat
tctcaactaattgaaaccaaggggatctactacaaacttgtgaacatgcaggcaatcgag
actgaagatccatcatcagaaaaagatgagaatacagtcagcatcaaaagaaatggatct
ccgtcaaatctggatgagtcctttaagacaggactgagaagaggatcaactcggagaagc
atgaaaaagccaaatgatactgatgggaaaggtggttcacctgctgaagaattacctcca
gtttcatttctgaaagttatgaagttgaacaaaaaagaatggccgtactttgtagctgga
actctgtgttcagttgtcaatggagctttacaacctgcatttgcagtcatattttcagaa
attatagggattttttcagaaacagatgaaaatgttttgagagaaaagagcaacttgtat
tcactgctgtttttagcaattgggattgtttcgttttttactttctttgttcagggtttt
gcatttggcaaagctggagaaattcttacaatgaggcttcgattcatggcatttaaagca
atgctgagacaggacatggcctggtttgatgaccctaaaaacagcactggagcactgaca
acaagacttgctaatgatgcctcacaagtgaaaggagcaactggcgtcagattggcatta
attgcccaaaacatatctaacctgggaactggtattattatatctttagtttatggctgg
cagctgaccctgttacttttagctgttgtaccaatcatcgcagtggcaggaatgattgaa
atgaagatgttggccgggcacgcaaaaaaagataaaatagagctggaagctgcaggaaag
attgcaacagaagctatagaaaatattcgaactgttgctagtttgacacgggaaaaaagg
tttgagttgatgtatggagagcatttgtatgtaccatacagaaattctgtgaagaaggca
catatatttgggttttgttttgccctttcacaagcaatgatgttttttacctatgctggc
tgtttccgctttggagcctatcttgtggttaacgggcacatggagtacaaaagtgtgttc
ttagtgttttcagctgttgtatttggtgctatggcattaggacaaaccagttcttttgca
ccagactatgccaaagccaagatatcagcagcccacttgtttgtgctatttgatagagta
ccttcaatagacagttactgcgaagatggagagaaacctgtaacatttgagggaaacacc
aggatcaaagatgtaaaatttaactatccaaaccgaccagaggtcaaaatcctccaaggc
ttgaatctaaaagtagaaaaaggagaaacattggctcttgttggtagcagtggatgtgga
aagagcactgttgttcagctacttgagagattttacgatccactcagtggagaaattgag
tttgatgacaaaggtgccaaaacactaaatatccagtggctgagatcccacattggtatc
gtctcacaagagccaatcctgtttgacttcaccatcgccgaaaacatcgcatacggggac
aacactcgggaggtgtcccatgaggaaatcattagtgcagcaaaagcagccaatattcat
tccttcattgactctctgccagaaaaatacaatactcgtgtaggagacaagggaacacag
ctttctggtggtcagaaacaacgtattgctattgctcgagctcttgtacgtaagccacag
attctgctgctggatgaagccacgtctgccttagacacagaaagcgaaaagattgtccag
gaagcactggataaagccagagaaggccgcacctgcatcgtgatagctcaccgcctgtcc
accatccagaatgctgacaagattgctgtgatccagaacggcaagatcatagagcaaggg
actcatcagcagcttctggctgaaaaaggcttctactattcactggtcaatgttcaaagt
gggtcttgcaacatgtaa
DBGET
integrated database retrieval system
