Tympanuchus pallidicinctus (lesser prairie-chicken): 128086416
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Entry
128086416 CDS
T08967
Symbol
CSPG5
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tpai00535
]
128086416 (CSPG5)
Proteoglycans [BR:
tpai00535
]
Cell surface proteoglycans
Others
128086416 (CSPG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chon_Sulph_att
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
128086416
NCBI-ProteinID:
XP_052551019
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All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MAPPAPPPRAALTLLLALSAIGPAAPAPEWPPRNGSAGRAWGGSLQNAAPINGTEPLGPQ
LEPPGGGPATADPTVGCMGCSGEEAASSVPPAPDAAQDPRLGITGPGDGDGGAVALGSPE
EVGSGEQPTRAGVGPTEGLTPGPPSLGLSSPGPNLGLPDPNLSLDLPDPNLGLPDPNLGL
PNPSLGLPSPGPTLDRPIPNPNPNLDLPNPNPSLGIPTSNLGLSNPNVALTSPSPNPGTE
PNLLPVAEDSEVSMELPQPSSSPAPAQRARGRTDRTWLGAPEPISAAPGTEEPPEIIDVD
YYDVFDGGEGPGGGRGAGGAAQREPGGAATPWGLHELYDDFTPFDEADFYPTTSFYAEGD
EEEEEELEEDEEEEEEEDGGLEDENGYRPPASAAPRVPPPPSPTEGSPMARPRPGERAVP
ENSSECRNGYVRHNSSCRSVCDLVPSYCHNGGQCYLVESHGAFCRCNTQDYTWHKGTRCE
AIVTDFQVLCVAVGSAALVLLLLFMLTVFFAKKLYLLKTENSKLRKTKYRTPSELHNDNF
SLSTIAEGSHPNDDPGAPHKLQDPLKPGLKDEEPLSILSAAPEEGSKGEPGGCGVPCLHN
NLG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcccccccggccccgccgccccgcgccgccctcactctgctgctggcgctgagcgcg
atcggccccgccgcgcccgcgcccgagtggccgccccgcaacggcagcgcaggcagagcc
tgggggggctccctgcagaatgcagcccccatcaacggcactgagccattgggaccccag
ctggagccgcccggggggggcccggccaccgccgaccctacagtggggtgcatggggtgc
agcggagaggaggccgccagctctgtgccccccgcgcccgacgcagcccaggacccccgg
ctcggcattactgggcccggcgatggcgatggcggtgcggtggccctgggcagccccgag
gaggtcggcagcggcgagcagcccaccagggccggcgttgggcccacggaggggctgaca
ccgggtccccccagccttgggctctccagcccagggcccaacctcggtcttcccgacccc
aacctcagcctcgaccttcctgatcctaatctcggtcttcctgaccccaacctcggtctt
cccaaccccagccttggtctccccagcccaggacccacccttgaccgtcccattcccaac
cccaaccccaaccttgatcttcccaaccccaaccccagccttggtattcccacatccaac
cttggtctttccaaccccaacgtcgcccttaccagccccagcccaaacccaggcaccgaa
cccaaccttcttcctgtggccgaagactcggaggtgtccatggagctcccccagccctcc
tccagcccggccccggcgcagagggcccgcggccgcacggaccgcacgtggttgggcgct
ccggagcccatcagtgccgccccgggcacagaggagccgcctgagatcatcgacgtcgat
tactacgatgtgttcgacggcggcgaagggcccgggggcggccgtggggcgggcggcgcg
gcgcagagggagccgggtggtgcggcaacaccgtggggcctccacgagctctacgatgac
ttcacgcccttcgacgaagccgatttctaccccaccacctccttctacgccgaaggggat
gaggaggaggaggaggagctggaggaagacgaagaggaggaggaggaggaagacggcggt
ctggaggatgagaacggctacagaccacccgcctcggctgcgccccgcgtcccaccgccc
cccagccccacggaggggagccccatggcgcggccgaggcccggggagcgcgcggtgccg
gagaacagcagcgagtgccggaacggatacgtgcggcacaacagctcctgccgctccgtc
tgcgacctcgtccccagctactgccacaatggcggccagtgctacctggtggagagccac
ggggccttctgcaggtgcaacacacaggactacacgtggcacaaggggacgcgctgcgag
gccatcgtcaccgacttccaggtgctgtgcgtggccgtgggctcggccgcgctggtgctg
ctgctgctcttcatgctcacggtcttctttgccaagaagctctacctgctcaagacggag
aacagcaaactgcgcaagaccaaataccgcactccgtccgagctgcacaacgacaacttc
tcgctgtccaccatcgccgagggctcccacccgaacgatgaccccggcgcaccccacaag
ctgcaggacccgctgaagcctggcctgaaggacgaggagccgctcagcatcctcagcgcc
gcgccggaggagggcagcaagggcgagccagggggctgtggggtgccctgcctgcacaac
aacctggggtag
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