Tympanuchus pallidicinctus (lesser prairie-chicken): 128086824
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Entry
128086824 CDS
T08967
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03430
Mismatch repair
tpai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128086824 (MLH1)
03460 Fanconi anemia pathway
128086824 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128086824 (MLH1)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128086824 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Nrap
Motif
Other DBs
NCBI-GeneID:
128086824
NCBI-ProteinID:
XP_052551741
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MALVAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQ
VQDNGCGIRKEDLHIVCERFTTSKLQKFEDLAGISTYGFRGEALASISHVAHVTVTTKTA
DAKCAYRASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKNPSEEYAKILEVV
GRYAIHNSGISFSVKKQGDTVSDVRTLANATTVDNIRSIFGNAVSRELIEVGCEDVNLAF
KMKGYITNANYSVKKCIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAP
KNVDVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGAECSSSEVV
KSAASSSTATKGTSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSTGPTEETTGVNVGAPE
GTSGGQQDRPARPQDAEMEDVSELLETADVIEMADVQQDAVMPGGLSKSGHLSPEKALPR
KRPREDTDIQMEEDTRKEMTAACTPKRRIINLTSVLTLQEEISSQAHESLQEMLRDHSFV
GCVSPQWALVQHRTKLYLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELAMLALE
DPESGWTEEDGPKEGLAEYIVEFLKKKTEMLKDYFSLEIDEEGNLTGLPLLIDNYIPLLE
GLPMFVLRMATEVNWDEEKECFESLSKELSMFYSIRKQYIIDETNPTSSQNEDSDSGSPP
WKWTVEHVVYKAFRTHLLPPKHFTDDGNILQLANLPDLYKVFERC
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtagctggtgtcatccggcggctggatgaggccgtggtgaaccgcatcgcg
gccggcgaggtcatccagagaccggcaaacgccattaaggagatgatagagaactgtttg
gatgctaaatctacaagtatccaggtggtagtcaaagaaggtggtctgaagctcatccag
gtccaagataacggctgtggtatcaggaaggaagatctgcacatcgtttgtgagaggttt
actaccagtaaactgcagaaatttgaagacttggctggtatttcaacgtatggttttagg
ggtgaggcattggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagct
gatgcaaagtgtgcatacagagcttcttacagtgatggaaaaatcaaagctcccccaaaa
ccttgtgctggaaaccaagggacacaaatcatggttgaagatcttttttacaatgtaaat
acaaggaggaaagctttaaaaaacccgagtgaagagtatgcaaaaatactagaagttgtt
ggcaggtatgccatccataactcaggtatcagcttttcagttaaaaagcaaggtgatact
gtgtcagatgttagaactttagcaaatgctacgacggtggacaacatcaggtccatcttt
ggaaatgctgttagcagggaactcatagaagtgggatgtgaagatgtaaatctggccttt
aagatgaaaggctacatcacgaatgccaactactctgtgaagaaatgtatatttttactc
ttcataaaccatcggctggtagagtcaactgctttgcggaaagccatagagactgtgtat
gctgcttatttgccaaaaagtactcatccgttcctatacttaagcctggaaatagcccct
aaaaatgttgatgtgaatgtgcaccctacaaaacatgaggtccacttccttcatgaagac
agcattctagagcgtgtgcaacaacacatagagagcaagctgctgggttctaattcttca
aggatgtactttactcagacattgcttccaggggccgaatgttcttccagtgaggtggta
aaatcagcagcaagctcttccacggctactaaaggaaccagtgataaagtttacgctcac
caaatggtccgcactgattcccgagagcagaagttggatgcttttcttcagccagtgaac
aaccccctgagtacaggccccaccgaagagacaacaggggttaacgtgggagctccggag
ggcacatcaggaggccaacaggaccgtcctgctaggccacaggatgctgaaatggaagac
gtgagtgagcttctggaaacagctgatgtaattgaaatggctgacgttcagcaggatgca
gtgatgcctggagggctgagtaagagtggacatttgtctcctgagaaagcacttcctcga
aagagaccacgggaagacacagacatacaaatggaagaagacaccaggaaggaaatgact
gctgcctgcacccctaaaagaagaattatcaatttgaccagcgtgctgactctccaggag
gaaattagcagccaggcacatgaaagtcttcaggagatgctgcgcgatcactcatttgtt
ggctgtgtcagccctcagtgggctctggtgcagcatcggacaaaactgtatcttctcaat
acaacaaaactcagccaagaactcttctaccagatacttatttatgactttgcaaacttt
ggtgttctaaggctctctgaaccagctcctttatatgagcttgcaatgcttgctttagag
gacccagagagtggctggacagaagaagatggcccaaaagaaggccttgctgagtacata
gttgagtttctgaaaaagaagactgaaatgttaaaagactatttctctcttgaaattgat
gaggaaggaaaccttactggattaccactcctgatagacaactacattcccctgctggag
ggactaccgatgtttgtccttcgtatggccactgaggtaaactgggatgaagaaaaggag
tgctttgaaagcctaagtaaagaactgtctatgttctactccattagaaaacaatatata
atagatgaaaccaacccgacaagctctcagaatgaggattctgactctggttcaccacca
tggaaatggacagtggagcatgttgtttacaaggccttcaggactcatcttttacctcct
aaacacttcacagatgacggcaatattttgcagcttgctaacctgcctgacttgtataaa
gtttttgagagatgctaa
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