Tympanuchus pallidicinctus (lesser prairie-chicken): 128086883
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Entry
128086883 CDS
T08967
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04621
NOD-like receptor signaling pathway
tpai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128086883 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128086883 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tpai04054
]
128086883 (NOD1)
Pattern recognition receptors [BR:
tpai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128086883 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
SpoU_sub_bind
AAA_16
FumaraseC_C
AAA_22
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
128086883
NCBI-ProteinID:
XP_052551848
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MEGHLCANLKTCVEKPLAASPPSCIALLKVYRELLVSKIRHTQCLLDNLINNEYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFICVLQKVTDAYYELQPWLDEIGYQPSENI
GSKPVVNTDPVSRYCQKLRYELGRDSKFVMSYAQREEMLLEEIYSNSIMEMVNFTNESLG
EVCQLQALFDDTVGVINEDGETVYVFGDAGIGKSILLQKIQSLWAKKQLDVGAKFFFHFR
CRMFSCFKEDEAVCLKDLLFRYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SGVPEMCSPNEPVHPLVLLVSLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSSS
NLKEYTALVFKDAGQRTLILNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMFDSHELPD
CSVTLTDVFLLMIEVHLNRSLKTSLLKNNVRSQAEVFKSRKETLLALGKIAYKGMRNSIF
VFEQEEVSSANISEEDLQLGFLRTVKGYSGCDDQSTYEFLHLTLQSFFTALYLVMEERVG
IKELLQFFNECSSAETAQRTCFHIAWLKKPLTGEDPFRNNEHFHFTNLFLCGLLSRSKEK
LFKQLVLPAVIRKKRKTLITYLGGSMKSHLKGVTRSRLLKYNQVQVQPNFVWMLRCLYET
QNETVGKLAAKRMHANYIKLTYCNAYSADCSAISFVVHHFRKRLALDLDNNNINDYGVKQ
LLPCFSKLAVIRLSVNQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKNTTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEALQHNNSVKIFWLTKNELDDEAAMSFAEMLKINKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFESEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacctttgtgctaacttgaagacttgtgtggaaaaacctctggcagccagt
cctccatcctgcattgctttgctgaaggtgtaccgagagcttctggtcagtaagatccgg
cacacccagtgtttgcttgacaacttgattaacaatgagtacttctccactgaagatgca
gagattgttgtccagtttccaactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaggaagtttcagaatatttcatctgtgtcctgcagaaagtcactgat
gcttactatgaacttcagccttggctggatgaaataggttaccagccttcagagaatatt
ggtagtaaacctgtggtaaatacagatccagttagcaggtactgccaaaaactcagatat
gaactgggacgggactccaaattcgttatgtcgtatgcgcagagggaagagatgctgctg
gaagaaatctactctaacagtattatggagatggtcaattttaccaatgagagcctgggc
gaagtgtgtcaattacaagccctttttgatgatacagttggggtaataaatgaagatgga
gagactgtttatgtctttggtgatgcaggaattggaaaatctatcttgctgcaaaagata
caaagtctttgggccaaaaaacagttggatgtaggggctaagtttttcttccatttccga
tgtaggatgtttagttgctttaaggaagatgaagctgtatgtttgaaagacttactcttc
agatataattgctacccagatcaggaccccacagaggtgttccaccacatcttgcagttc
cctcacacggttcttttcacattcgatggctttgatgagatctattccaactttgatctc
agcggtgttcctgagatgtgttcacccaatgaacccgtccaccctctggtgctgctggta
agccttctcagaggaaagcttcttaagggatccaagaaaattcttacagcacggacagga
actgaaatccaaagaaatatcattagaaagaaagtattgcttcgtggtttctccagcagt
aacctgaaggaatacactgccttggtttttaaagatgcggggcagcgaacgctgatactg
aaccagctggaagctaatcccaacctctgtagtttgtgttcagtgcctttattctgttgg
attatctttaaatgttatgaacatttccactccatgtttgacagccatgagcttccagac
tgttctgttacattgacagatgtatttttgctcatgattgaagtccatctaaaccggtct
ctgaaaacaagtttgctgaagaacaacgtcaggagccaagcagaggtgttcaaatcaaga
aaggaaactcttctagctttgggtaaaattgcatacaaagggatgaggaactctatcttt
gtctttgagcaagaggaggtctcatcagcaaacatctctgaagaagatttgcagttgggt
tttctcaggacagttaaaggttacagtggctgtgacgatcaatccacttatgagttcttg
cacttaacccttcagtcttttttcaccgctttgtacctagttatggaagagagggtgggg
attaaggagttacttcagtttttcaatgaatgctcttctgctgagactgcccagcgtact
tgctttcacattgcttggctgaagaaaccactcacaggggaggatcctttccgaaacaat
gaacacttccattttaccaatcttttcctttgtggcctgctttccagatccaaggagaag
ctcttcaaacaattagttttgcctgcagtcattagaaagaagaggaagacactcatcaca
taccttggggggagcatgaaatcccatctgaagggtgtcactcggtccaggcttctaaag
tacaatcaggtgcaggttcagccaaactttgtttggatgctgaggtgtctttatgagact
caaaatgagacagtgggaaagctggctgcgaaacgcatgcatgccaattacatcaagctt
acatactgcaatgcctactctgctgactgcagtgctatttcctttgtcgtgcatcacttt
cgaaagcgcttggctctggatttggacaacaacaacatcaatgactatggggtgaaacag
ctgctaccgtgtttcagcaagcttgcagtcatcaggctcagtgtaaatcagatcacagat
catggagcaaggatattgtacgaagaactctccaagtaccaaattgtatcttacttgggc
ttatacaacaatcagatcactgacattggagccaaatatgttgcaaaacttattgaagag
tgttcaagccttgaatatgttaaaataggagcaaacaaaataactagtgaaggggggaag
tgccttgcccaggccatccagaagaacacaacaatgtttgaaatcgggatgtggggcaat
caggttggagacgaaggtgcaaaggcatttgcagaggccctgaggaaccatccgaggttg
acaaatgtgagtctcgcatttaacggcatcacaacagagggaggcaaaagcattgctgaa
gctttgcagcacaacaactccgtgaaaatattctggctgacaaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaagatcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggagtgaagtacctcagcgaagctctcaaggag
aacacagccatcaaagaagtctgtttgaatgggaacctgataagtcaagaagaagccaaa
gcttttgaaagtgaagaacggatcatttgcttctga
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